RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 SYT10Q6XYQ8 523 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 TOM1L2Q6ZVM7 507 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 PAQR9Q6ZVX9 377 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 NET1Q7Z628 596 aaPredicted RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 CCDC91Q7Z6B0 441 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 YRDCQ86U90 279 aaKnown RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 ZNF410Q86VK4 478 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 C10orf53Q8N6V4 93 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 LRRC17Q8N6Y2 441 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 SYT14Q8NB59 555 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 ACBD4Q8NC06 268 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 DEFB124Q8NES8 71 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 GOT1L1Q8NHS2 421 aaPredicted RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 WDR36Q8NI36 951 aaKnown RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 ZFP90Q8TF47 636 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 SLC5A11Q8WWX8 675 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 ART4Q93070 314 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 TMEM45BQ96B21 275 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 PINX1Q96BK5 328 aaKnown RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 CCDC51Q96ER9 411 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 SDSLQ96GA7 329 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 EPSTI1Q96J88 318 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 ELMO2Q96JJ3 720 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 BMFQ96LC9 184 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 JAKMIP1Q96N16 626 aaKnown RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 CBWD1Q9BRT8 395 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 NDUFAF3Q9BU61 184 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 MRPL9Q9BYD2 267 aaKnown RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 KRTAP2-1Q9BYU5 128 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 OSBPL8Q9BZF1 889 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 SLC5A7Q9GZV3 580 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 DDX47Q9H0S4 455 aaKnown RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 ZCCHC17Q9NP64 241 aaKnown RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 PRMT8Q9NR22 394 aaPredicted RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 ARGLU1Q9NWB6 273 aaPredicted RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 PAK1IP1Q9NWT1 392 aaPredicted RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 GHRLQ9UBU3 117 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 COPS7AQ9UBW8 275 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 MIOXQ9UGB7 285 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 FAM153AQ9UHL3 310 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 BCAP29Q9UHQ4 241 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 ZNF222Q9UK12 451 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 TNRC6AQ8NDV7 1962 aaKnown RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 SYCP2Q9BX26 1530 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 MGAMO43451 1857 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 ZFYVE9O95405 1425 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 TNS3Q68CZ2 1445 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 DLEC1Q9Y238 1755 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 UBE4BO95155 1302 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 SH3TC1Q8TE82 1336 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 HELZP42694 1942 aaKnown RBP0.36□□□□□ -2.35
SGMS1-205ENST00000498514 MYLKQ15746 1914 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 GREB1Q4ZG55 1949 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 INTS1Q8N201 2190 aaKnown RBP0.36□□□□□ -2.35
SGMS1-205ENST00000498514 PLXNB2O15031 1838 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 FRMPD3Q5JV73 1810 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 CCDC18Q5T9S5 1454 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 FYCO1Q9BQS8 1478 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 PRXQ9BXM0 1461 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 MDC1Q14676 2089 aaKnown RBP0.36□□□□□ -2.35
SGMS1-205ENST00000498514 RFX7Q2KHR2 1363 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 DHX29Q7Z478 1369 aaKnown RBP0.36□□□□□ -2.35
SGMS1-205ENST00000498514 USP47Q96K76 1375 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 A0A1W2PRQ8 180 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 A0A1W2PRV1 198 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 TTC26A0AVF1 554 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 FAM170AA1A519 330 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 VPS37CA5D8V6 355 aaPredicted RBP0.36□□□□□ -2.35
SGMS1-205ENST00000498514 H3BMH7 237 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 ALOX15BO15296 676 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 ZBTB14O43829 449 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 STK17BO94768 372 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 LALBAP00709 142 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 CA3P07451 260 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 LINC00869P0C866 280 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 PDHBP11177 359 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 RALAP11233 206 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 POU2F1P14859 743 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 UQCRBP14927 111 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 CASP3P42574 277 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 TNNT3P45378 269 aaPredicted RBP0.36□□□□□ -2.35
SGMS1-205ENST00000498514 PITPNBP48739 271 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 CNN1P51911 297 aaKnown RBP0.36□□□□□ -2.35
SGMS1-205ENST00000498514 HNRNPFP52597 415 aaKnown RBP0.36□□□□□ -2.35
SGMS1-205ENST00000498514 NME5P56597 212 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 CNTN2Q02246 1040 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 RIPPLY1Q0D2K3 151 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 SNTB2Q13425 540 aaKnown RBP0.36□□□□□ -2.35
SGMS1-205ENST00000498514 SNX1Q13596 522 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 ZSWIM7Q19AV6 140 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 TMEM183BQ1AE95 376 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 C2orf76Q3KRA6 126 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 LINC00303Q3SY05 128 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 TCEAL5Q5H9L2 206 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 PRAMEF7Q5VXH5 474 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 LIPNQ5VXI9 398 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 TPGS2Q68CL5 300 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 PVRIGQ6DKI7 326 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 OR8G2PQ6IF36 304 aa0.36□□□□□ -2.35
SGMS1-205ENST00000498514 FRMPD2BQ6IN97 320 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms