RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 LRRC34Q8IZ02 419 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 BCL6BQ8N143 479 aaPredicted RBP9.93□□□□□ -0.82
CDK9-205ENST00000498339 MIER2Q8N344 545 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 TRIML2Q8N7C3 387 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 GLB1L3Q8NCI6 653 aaPredicted RBP9.93□□□□□ -0.82
CDK9-205ENST00000498339 OR6N1Q8NGY5 312 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 SYNPRQ8TBG9 265 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 CCL17Q92583 94 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 ANP32BQ92688 251 aaKnown RBP9.93□□□□□ -0.82
CDK9-205ENST00000498339 POP5Q969H6 163 aaKnown RBP9.93□□□□□ -0.82
CDK9-205ENST00000498339 KTI12Q96EK9 354 aaPredicted RBP9.93□□□□□ -0.82
CDK9-205ENST00000498339 C1orf147Q96MC9 270 aaPredicted RBP9.93□□□□□ -0.82
CDK9-205ENST00000498339 FOXB1Q99853 325 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 EMC6Q9BV81 110 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 PTDSS2Q9BVG9 487 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 CDH20Q9HBT6 801 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 SLCO1C1Q9NYB5 712 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 ARMCX1Q9P291 453 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 B3GAT1Q9P2W7 334 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 RPS6KB2Q9UBS0 482 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 ZNF443Q9Y2A4 671 aaPredicted RBP9.93□□□□□ -0.82
CDK9-205ENST00000498339 CACNG2Q9Y698 323 aa9.93□□□□□ -0.82
CDK9-205ENST00000498339 NPIPB7O75200 414 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 FOXH1O75593 365 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 SERPINI2O75830 405 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 KNG1P01042 644 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 PRG2P13727 222 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 GCH1P30793 250 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 LARS2Q15031 903 aaKnown RBP9.92□□□□□ -0.82
CDK9-205ENST00000498339 SPANXN4Q5MJ08 99 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 BRICD5Q6PL45 260 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 SERPINA11Q86U17 422 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 C20orf196Q8IYI0 205 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 TMEM123Q8N131 208 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 MNS1Q8NEH6 495 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 UBE2FQ969M7 185 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 ELMOD3Q96FG2 381 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 PANX1Q96RD7 426 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 MRI1Q9BV20 369 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 MS4A7Q9GZW8 240 aaPredicted RBP9.92□□□□□ -0.82
CDK9-205ENST00000498339 DENND2DQ9H6A0 471 aaPredicted RBP9.92□□□□□ -0.82
CDK9-205ENST00000498339 ARMC7Q9H6L4 198 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 ASIC5Q9NY37 505 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 PLEK2Q9NYT0 353 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 P2RX2Q9UBL9 471 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 ZNF281Q9Y2X9 895 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 AUP1Q9Y679 476 aa9.92□□□□□ -0.82
CDK9-205ENST00000498339 CCDC154A6NI56 674 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 TRAF3IP2O43734 574 aaPredicted RBP9.91□□□□□ -0.82
CDK9-205ENST00000498339 OR2T1O43869 369 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 GPANK1O95872 356 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 SHBGP04278 402 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 BCHEP06276 602 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 PATE4P0C8F1 98 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 CCL2P13500 99 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 MAKP20794 623 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 GRPRP30550 384 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 S100A3P33764 101 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 CLNS1AP54105 237 aaKnown RBP9.91□□□□□ -0.82
CDK9-205ENST00000498339 ERVS71-1P61550 626 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 TXNL4AP83876 142 aaKnown RBP9.91□□□□□ -0.82
CDK9-205ENST00000498339 CASP8Q14790 479 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 DPY19L1Q2PZI1 675 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 COX20Q5RI15 118 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 RNF220Q5VTB9 566 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 ZNF621Q6ZSS3 439 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 H1FNTQ75WM6 255 aaPredicted RBP9.91□□□□□ -0.82
CDK9-205ENST00000498339 IFT20Q8IY31 132 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 SLC30A7Q8NEW0 376 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 EPS8L3Q8TE67 593 aaKnown RBP9.91□□□□□ -0.82
CDK9-205ENST00000498339 UBLCP1Q8WVY7 318 aaPredicted RBP9.91□□□□□ -0.82
CDK9-205ENST00000498339 C11orf40Q8WZ69 217 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 GTF3AQ92664 365 aaKnown RBP9.91□□□□□ -0.82
CDK9-205ENST00000498339 SLC38A4Q969I6 547 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 TMIGD2Q96BF3 282 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 TRIM44Q96DX7 344 aaPredicted RBP9.91□□□□□ -0.82
CDK9-205ENST00000498339 APOPT1Q96IL0 206 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 ZNF48Q96MX3 618 aaPredicted RBP9.91□□□□□ -0.82
CDK9-205ENST00000498339 ZNF75AQ96N20 296 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 RNF121Q9H920 327 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 CALML5Q9NZT1 146 aa9.91□□□□□ -0.82
CDK9-205ENST00000498339 PURGQ9UJV8 347 aaKnown RBP9.91□□□□□ -0.82
CDK9-205ENST00000498339 IGHV3OR16-10A0A075B7F0 116 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 ZNF726A6NNF4 738 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 E9PBE3 544 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 M0QZ24 198 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 SPRY3O43610 288 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 SERPINA5P05154 406 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 FAM153BP0C7A2 387 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 OR8G3PP0DMU2 310 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 SERPINB5P36952 375 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 MTNR1AP48039 350 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 CRISP3P54108 245 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 NME5P56597 212 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 HOXC5Q00444 222 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 EGR4Q05215 589 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 SLC3A1Q07837 685 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 SRSF4Q08170 494 aaKnown RBP9.9□□□□□ -0.82
CDK9-205ENST00000498339 SLC9A3R2Q15599 337 aa9.9□□□□□ -0.82
CDK9-205ENST00000498339 RPS26P11Q5JNZ5 115 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms