RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 PRSS3P35030 304 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 DHRS2Q13268 280 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 FAM46CQ5VWP2 391 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 OTPQ5XKR4 325 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 OR10K2Q6IF99 312 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 RPL22L1Q6P5R6 122 aaKnown RBP11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 STAC2Q6ZMT1 411 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 ZNF761Q86XN6 746 aaPredicted RBP11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 HIST1H2BAQ96A08 127 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 NRIP2Q9BQI9 281 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 ATG5Q9H1Y0 275 aa11.96□□□□□ -0.49
GAPVD1-220ENST00000497580 SNRPNP63162 240 aaKnown RBP11.96□□□□□ -0.5
GAPVD1-220ENST00000497580 CDPF1Q6NVV7 123 aa11.96□□□□□ -0.5
GAPVD1-220ENST00000497580 FOXRED2Q8IWF2 684 aa11.96□□□□□ -0.5
GAPVD1-220ENST00000497580 CNRIP1Q96F85 164 aaPredicted RBP11.96□□□□□ -0.5
GAPVD1-220ENST00000497580 RRAGCQ9HB90 399 aa11.96□□□□□ -0.5
GAPVD1-220ENST00000497580 STEAP1Q9UHE8 339 aa11.96□□□□□ -0.5
GAPVD1-220ENST00000497580 SCN8AQ9UQD0 1980 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 RHPN2P1A8MT19 583 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 YIF1AO95070 293 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 IFNGP01579 166 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 SERPINA5P05154 406 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 TPT1P13693 172 aaKnown RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 NANOS3P60323 173 aaKnown RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 CAP1Q01518 475 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 PDZD11Q5EBL8 140 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 GDPD4Q6W3E5 623 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF836Q6ZNA1 936 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 DMRTC2Q8IXT2 367 aaPredicted RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 DND1Q8IYX4 353 aaKnown RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 RNF141Q8WVD5 230 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 PIGQQ9BRB3 760 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 CPEB1Q9BZB8 566 aaKnown RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF443Q9Y2A4 671 aaPredicted RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 ADAM18Q9Y3Q7 739 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 CASP8AP2Q9UKL3 1982 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 UBE2CO00762 179 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 KLF4O43474 513 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 ZIC2O95409 532 aaPredicted RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 ELFN1P0C7U0 828 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 EIF2S3P41091 472 aaKnown RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 ID4P47928 161 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 PRLHRP49683 370 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 EIF2B1Q14232 305 aaKnown RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 INPP5JQ15735 1006 aaPredicted RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 ARSIQ5FYB1 569 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 ARHGAP40Q5TG30 622 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 TTLL10Q6ZVT0 673 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 GALNT16Q8N428 558 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 OR10H5Q8NGA6 315 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 SEC11CQ9BY50 192 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 LHX9Q9NQ69 397 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 UPB1Q9UBR1 384 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 CARHSP1Q9Y2V2 147 aaKnown RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF281Q9Y2X9 895 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 MED31Q9Y3C7 131 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 ALOX12BO75342 701 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 POP4O95707 220 aaKnown RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 PMS2P2O95744 297 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 ARG1P05089 322 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 GALTP07902 379 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 CERS1P27544 350 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 RPS27P42677 84 aaKnown RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 ACTA2P62736 377 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 ACTG2P63267 376 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 DCDP81605 110 aaKnown RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 PON3Q15166 354 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 MPPED2Q15777 294 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF585AQ6P3V2 769 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 GAREM2Q75VX8 874 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 TAF8Q7Z7C8 310 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 RANBP3LQ86VV4 465 aaPredicted RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 OR4N5Q8IXE1 308 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 FAM24BQ8N5W8 94 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 OR5M8Q8NGP6 311 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 SP7Q8TDD2 431 aaPredicted RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF689Q96CS4 500 aaPredicted RBP11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 Q96M85 177 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 SULT4A1Q9BR01 284 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 PCDHGA1Q9Y5H4 931 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 IER3IP1Q9Y5U9 82 aa11.95□□□□□ -0.5
GAPVD1-220ENST00000497580 A0A1W2PRU2 124 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 SULT2B1O00204 365 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 OGG1O15527 345 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 AKR1C4P17516 323 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 POLR2LP62875 67 aaKnown RBP11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 OR1Q1Q15612 314 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 LCTLQ6UWM7 567 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF227Q86WZ6 799 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 MOAP1Q96BY2 351 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 GGACTQ9BVM4 153 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 MARCH5Q9NX47 278 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 LSM7Q9UK45 103 aaKnown RBP11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 CSAG2Q9Y5P2 127 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 CACNA1IQ9P0X4 2223 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 SCN3AQ9NY46 2000 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 A0A1B0GV50 99 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 CXorf65A6NEN9 183 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 URADA6NGE7 173 aa11.94□□□□□ -0.5
GAPVD1-220ENST00000497580 ZNF749O43361 778 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms