RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 IFNGR1P15260 489 aa17.75■□□□□ 0.43
CTSD-206ENST00000497544 AGAP20933 346 aa17.75■□□□□ 0.43
CTSD-206ENST00000497544 RFX4Q33E94 735 aa17.75■□□□□ 0.43
CTSD-206ENST00000497544 RPL13AP3Q6NVV1 102 aa17.75■□□□□ 0.43
CTSD-206ENST00000497544 CD300LDQ6UXZ3 194 aa17.75■□□□□ 0.43
CTSD-206ENST00000497544 SPNS3Q6ZMD2 512 aa17.75■□□□□ 0.43
CTSD-206ENST00000497544 IGFN1Q86VF2 1251 aa17.75■□□□□ 0.43
CTSD-206ENST00000497544 LRRC75AQ8NAA5 344 aa17.75■□□□□ 0.43
CTSD-206ENST00000497544 LILRB4Q8NHJ6 448 aa17.75■□□□□ 0.43
CTSD-206ENST00000497544 FANK1Q8TC84 345 aa17.75■□□□□ 0.43
CTSD-206ENST00000497544 ITLN2Q8WWU7 325 aaPredicted RBP17.75■□□□□ 0.43
CTSD-206ENST00000497544 DNAJC9Q8WXX5 260 aa17.75■□□□□ 0.43
CTSD-206ENST00000497544 APH1AQ96BI3 265 aa17.75■□□□□ 0.43
CTSD-206ENST00000497544 OR52D1Q9H346 318 aa17.75■□□□□ 0.43
CTSD-206ENST00000497544 MED29Q9NX70 200 aa17.75■□□□□ 0.43
CTSD-206ENST00000497544 EEF1E1-BLOC1S5C9J1V9 151 aa17.74■□□□□ 0.43
CTSD-206ENST00000497544 MCIDASD6RGH6 385 aa17.74■□□□□ 0.43
CTSD-206ENST00000497544 EEF1E1O43324 174 aaKnown RBP17.74■□□□□ 0.43
CTSD-206ENST00000497544 TRAF3IP2O43734 574 aaPredicted RBP17.74■□□□□ 0.43
CTSD-206ENST00000497544 SLC6A6P31641 620 aa17.74■□□□□ 0.43
CTSD-206ENST00000497544 NTF4P34130 210 aa17.74■□□□□ 0.43
CTSD-206ENST00000497544 DAP3P51398 398 aaKnown RBP17.74■□□□□ 0.43
CTSD-206ENST00000497544 SLC25A35Q3KQZ1 300 aa17.74■□□□□ 0.43
CTSD-206ENST00000497544 NHLRC1Q6VVB1 395 aa17.74■□□□□ 0.43
CTSD-206ENST00000497544 DPY19L2P2Q6ZN68 376 aa17.74■□□□□ 0.43
CTSD-206ENST00000497544 OR52L1Q8NGH7 329 aa17.74■□□□□ 0.43
CTSD-206ENST00000497544 NANOS1Q8WY41 292 aaKnown RBP17.74■□□□□ 0.43
CTSD-206ENST00000497544 SAMD8Q96LT4 415 aa17.74■□□□□ 0.43
CTSD-206ENST00000497544 CIB1Q99828 191 aa17.74■□□□□ 0.43
CTSD-206ENST00000497544 EMC6Q9BV81 110 aa17.74■□□□□ 0.43
CTSD-206ENST00000497544 TXNIPQ9H3M7 391 aa17.74■□□□□ 0.43
CTSD-206ENST00000497544 SMURF2Q9HAU4 748 aa17.74■□□□□ 0.43
CTSD-206ENST00000497544 IL20RAQ9UHF4 553 aa17.74■□□□□ 0.43
CTSD-206ENST00000497544 RCE1Q9Y256 329 aa17.74■□□□□ 0.43
CTSD-206ENST00000497544 SLC35F4A4IF30 521 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 FAM90A27PA6NNH2 459 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 PDLIM1O00151 329 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 MSTNO14793 375 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 CGAP01215 116 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 CD14P08571 375 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 CD8BP10966 210 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 ZNF26P17031 533 aaPredicted RBP17.73■□□□□ 0.43
CTSD-206ENST00000497544 OR3A2P47893 321 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 DAPP51397 102 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 BIDP55957 195 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 ERVK-25P63136 954 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 MELKQ14680 651 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 ACKR1Q16570 336 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 ANKRD34AQ69YU3 496 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 FAHD1Q6P587 224 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 KLHL17Q6TDP4 642 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 ZNF620Q6ZNG0 422 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.73■□□□□ 0.43
CTSD-206ENST00000497544 KIF18BQ86Y91 864 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 CLDN22Q8N7P3 220 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 ZNF610Q8N9Z0 462 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 RELL2Q8NC24 303 aaPredicted RBP17.73■□□□□ 0.43
CTSD-206ENST00000497544 ADAD1Q96M93 576 aaKnown RBP17.73■□□□□ 0.43
CTSD-206ENST00000497544 C9orf16Q9BUW7 83 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 IFT27Q9BW83 186 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 OSBPL10Q9BXB5 764 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 POLDIP3Q9BY77 421 aaKnown RBP17.73■□□□□ 0.43
CTSD-206ENST00000497544 ENKD1Q9H0I2 346 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 GABARAPL1Q9H0R8 117 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 OPN3Q9H1Y3 402 aaPredicted RBP17.73■□□□□ 0.43
CTSD-206ENST00000497544 EGLN3Q9H6Z9 239 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 KCNJ16Q9NPI9 418 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 IL20Q9NYY1 176 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 STX18Q9P2W9 335 aaKnown RBP17.73■□□□□ 0.43
CTSD-206ENST00000497544 ZNF346Q9UL40 294 aaKnown RBP17.73■□□□□ 0.43
CTSD-206ENST00000497544 CDH10Q9Y6N8 788 aa17.73■□□□□ 0.43
CTSD-206ENST00000497544 SLC43A1O75387 559 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 KRT33AO76009 404 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 SOX14O95416 240 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 SELENOPP49908 381 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 RPS6KA3P51812 740 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 FXYD6P3P58550 94 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 RPL27P61353 136 aaKnown RBP17.72■□□□□ 0.43
CTSD-206ENST00000497544 TOP3AQ13472 1001 aaPredicted RBP17.72■□□□□ 0.43
CTSD-206ENST00000497544 TFAP2EQ6VUC0 442 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 THSD4Q6ZMP0 1018 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 HDDC2Q7Z4H3 204 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 LUZP2Q86TE4 346 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 UBE2J2Q8N2K1 259 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 OR6X1Q8NH79 312 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 EME1Q96AY2 570 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 LRRC46Q96FV0 321 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 RBM4BQ9BQ04 359 aaKnown RBP17.72■□□□□ 0.43
CTSD-206ENST00000497544 KATNB1Q9BVA0 655 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 RBM4Q9BWF3 364 aaKnown RBP17.72■□□□□ 0.43
CTSD-206ENST00000497544 TSSK6Q9BXA6 273 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 PAPOLBQ9NRJ5 636 aaKnown RBP17.72■□□□□ 0.43
CTSD-206ENST00000497544 KRT84Q9NSB2 600 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 GRHPRQ9UBQ7 328 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 UPB1Q9UBR1 384 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 POFUT2Q9Y2G5 429 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 RRP15Q9Y3B9 282 aaKnown RBP17.72■□□□□ 0.43
CTSD-206ENST00000497544 IER3IP1Q9Y5U9 82 aa17.72■□□□□ 0.43
CTSD-206ENST00000497544 NPIPB13A6NJU9 1138 aa17.71■□□□□ 0.43
CTSD-206ENST00000497544 OR6C65A6NJZ3 312 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms