RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 HIST3H3Q16695 136 aa17.52■□□□□ 0.4
SCAMP3-209ENST00000497470 LRRC36Q1X8D7 754 aa17.52■□□□□ 0.4
SCAMP3-209ENST00000497470 PGGHGQ32M88 737 aa17.52■□□□□ 0.4
SCAMP3-209ENST00000497470 FBXW10Q5XX13 1052 aa17.52■□□□□ 0.4
SCAMP3-209ENST00000497470 ANKRD34AQ69YU3 496 aa17.52■□□□□ 0.4
SCAMP3-209ENST00000497470 C12orf73Q69YU5 71 aa17.52■□□□□ 0.4
SCAMP3-209ENST00000497470 TUSC5Q8IXB3 177 aa17.52■□□□□ 0.4
SCAMP3-209ENST00000497470 DNAJA3Q96EY1 480 aa17.52■□□□□ 0.4
SCAMP3-209ENST00000497470 DOCK7Q96N67 2140 aa17.52■□□□□ 0.4
SCAMP3-209ENST00000497470 CMC2Q9NRP2 79 aa17.52■□□□□ 0.4
SCAMP3-209ENST00000497470 ESPL1Q14674 2120 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 PRRC2CQ9Y520 2896 aaKnown RBP17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 M0R3G1 203 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 ZNHIT1O43257 154 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 MITFO75030 526 aaPredicted RBP17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 TNFSF13O75888 250 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 SOX14O95416 240 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 IFNGP01579 166 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 IGHG1P01857 330 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 ACADSP16219 412 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 EFNB1P98172 346 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 MYBPC1Q00872 1141 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 PMPCAQ10713 525 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 MRPL49Q13405 166 aaKnown RBP17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 GINS1Q14691 196 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 AAED1Q7RTV5 226 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 TMEM123Q8N131 208 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 KDM8Q8N371 416 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 MARVELD2Q8N4S9 558 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 DHRSXQ8N5I4 330 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 ASB5Q8WWX0 329 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 ZNF570Q96NI8 536 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 ERMAPQ96PL5 475 aaPredicted RBP17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 ZNF385AQ96PM9 386 aaKnown RBP17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 SLC38A2Q96QD8 506 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 OR2M2Q96R28 347 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 KCNK17Q96T54 332 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 TOR3AQ9H497 397 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 FAM118AQ9NWS6 357 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 FOXD3Q9UJU5 478 aaPredicted RBP17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 IER3IP1Q9Y5U9 82 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 HSPE1-MOB4S4R3N1 261 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 MED12LQ86YW9 2145 aa17.51■□□□□ 0.39
SCAMP3-209ENST00000497470 SLC35F4A4IF30 521 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 RPL36A-HNRNPH2H7BZ11 118 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 CCL21O00585 134 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 XKRYO14609 159 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 MPZL2O60487 215 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 SLC43A1O75387 559 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 SNAP29O95721 258 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 NOS3P29474 1203 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 CENPAP49450 140 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 CLDN17P56750 224 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 IL1RL1Q01638 556 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 SLC25A30Q5SVS4 291 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 ZNF362Q5T0B9 420 aaPredicted RBP17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 THEM4Q5T1C6 240 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 ABHD12BQ7Z5M8 362 aaPredicted RBP17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 DEPDC4Q8N2C3 294 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 GALNT4Q8N4A0 578 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 ZNF555Q8NEP9 628 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 ZNF566Q969W8 418 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 BOD1Q96IK1 185 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 TSPAN32Q96QS1 320 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 DDOQ99489 341 aa17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 VSX1Q9NZR4 365 aaPredicted RBP17.5■□□□□ 0.39
SCAMP3-209ENST00000497470 LOC100130705A0A1B0GUX0 176 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 KDM4EB2RXH2 506 aaPredicted RBP17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 MSTNO14793 375 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 CGAP01215 116 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 PGA4P0DJD7 388 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 PGA3P0DJD8 388 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 GGT2P36268 569 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 BIDP55957 195 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 CDC42P60953 191 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 ERVK-25P63136 954 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 ADARB1P78563 741 aaKnown RBP17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 ITGADQ13349 1161 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 KRR1Q13601 381 aaKnown RBP17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 ACSM5Q6NUN0 579 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 C20orf196Q8IYI0 205 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 OR4Q3Q8NH05 313 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 TMEM54Q969K7 222 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 APH1AQ96BI3 265 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 NMD3Q96D46 503 aaKnown RBP17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 STARD4Q96DR4 205 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 TXNDC15Q96J42 360 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 Q96M85 177 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 MBOAT4Q96T53 435 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 SLCO5A1Q9H2Y9 848 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 MED29Q9NX70 200 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 MALT1Q9UDY8 824 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 ADAM18Q9Y3Q7 739 aa17.49■□□□□ 0.39
SCAMP3-209ENST00000497470 KALRNO60229 2985 aa17.48■□□□□ 0.39
SCAMP3-209ENST00000497470 PRSS37A4D1T9 235 aa17.48■□□□□ 0.39
SCAMP3-209ENST00000497470 DVL2O14641 736 aa17.48■□□□□ 0.39
SCAMP3-209ENST00000497470 SURF4O15260 269 aa17.48■□□□□ 0.39
SCAMP3-209ENST00000497470 TRMUO75648 421 aaKnown RBP17.48■□□□□ 0.39
SCAMP3-209ENST00000497470 PPP1R3DO95685 299 aa17.48■□□□□ 0.39
SCAMP3-209ENST00000497470 ZNF3P17036 446 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms