RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 BPIFA2Q96DR5 249 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 RADILQ96JH8 1075 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 OR2M2Q96R28 347 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 NDEL1Q9GZM8 345 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 LIME1Q9H400 295 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 YY1AP1Q9H869 796 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 SLC17A5Q9NRA2 495 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 MAN2C1Q9NTJ4 1040 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 MGAT4BQ9UQ53 548 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 AURKCQ9UQB9 309 aa14.39□□□□□ -0.11
SF3A1-209ENST00000496189 A0A087WUU8 490 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 SLC35F4A4IF30 521 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 ENTPD5O75356 428 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 UPK3AO75631 287 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 ASAH2BP0C7U1 165 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 SAGP10523 405 aaPredicted RBP14.38□□□□□ -0.11
SF3A1-209ENST00000496189 PTAFRP25105 342 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 IFNGR2P38484 337 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 MAGEA2P43356 314 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 PRKCDQ05655 676 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 BSPH1Q075Z2 132 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 ANKRD16Q6P6B7 361 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 SLC35D2Q76EJ3 337 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 NRMQ8IXM6 262 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 OR1K1Q8NGR3 316 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 SLC7A13Q8TCU3 470 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 LIPHQ8WWY8 451 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 LRR1Q96L50 414 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 HS3ST6Q96QI5 342 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 ALPK1Q96QP1 1244 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 CCL19Q99731 98 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 KCNS3Q9BQ31 491 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 EMC6Q9BV81 110 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 ULBP2Q9BZM5 246 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 MED29Q9NX70 200 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 STX18Q9P2W9 335 aaKnown RBP14.38□□□□□ -0.11
SF3A1-209ENST00000496189 SLC25A15Q9Y619 301 aa14.38□□□□□ -0.11
SF3A1-209ENST00000496189 RPL36A-HNRNPH2H7BZ11 118 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 M0R1B8 84 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 M0R3G1 203 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 ZNF432O94892 652 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 BCL10O95999 233 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 HPRP00739 348 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 HLA-DOBP13765 273 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 HOXB1P14653 301 aaPredicted RBP14.37□□□□□ -0.11
SF3A1-209ENST00000496189 IFNGR1P15260 489 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 RRM2P31350 389 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 CSNK1A1P48729 337 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 SLC9A3P48764 834 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 ZNF83P51522 516 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 FOXG1P55316 489 aaPredicted RBP14.37□□□□□ -0.11
SF3A1-209ENST00000496189 BIDP55957 195 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 CAMK2DQ13557 499 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 ANKDD1AQ495B1 522 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 IQCCQ4KMZ1 466 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 C1orf146Q5VVC0 180 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 PODNL1Q6PEZ8 512 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 ASRGL1Q7L266 308 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 SLC46A3Q7Z3Q1 461 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 PIAS4Q8N2W9 510 aaPredicted RBP14.37□□□□□ -0.11
SF3A1-209ENST00000496189 LRRC17Q8N6Y2 441 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 OR52J3Q8NH60 311 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 FBXW5Q969U6 566 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 MBD6Q96DN6 1003 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 RSRC1Q96IZ7 334 aaKnown RBP14.37□□□□□ -0.11
SF3A1-209ENST00000496189 DHRS1Q96LJ7 313 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 FOXC2Q99958 501 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 CRLF2Q9HC73 371 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 GPR35Q9HC97 309 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 C20orf141Q9NUB4 165 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 FAIMQ9NVQ4 179 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 BEX4Q9NWD9 120 aaPredicted RBP14.37□□□□□ -0.11
SF3A1-209ENST00000496189 POU2F3Q9UKI9 436 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 POFUT2Q9Y2G5 429 aa14.37□□□□□ -0.11
SF3A1-209ENST00000496189 POLQO75417 2590 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 A0A1W2PR80 420 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 EFCAB9A8MZ26 197 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 ABCD4O14678 606 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 HS3ST1O14792 307 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 PIP5K1CO60331 668 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 ATE1O95260 518 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 NR2C1P13056 603 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 CAPZA2P47755 286 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 DAP3P51398 398 aaKnown RBP14.36□□□□□ -0.11
SF3A1-209ENST00000496189 LGALS3BPQ08380 585 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 CEACAM16Q2WEN9 425 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 DEFB113Q30KQ7 82 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 TBRG1Q3YBR2 411 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 CCDC36Q8IYA8 594 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 C20orf196Q8IYI0 205 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 ADGRG5Q8IZF4 528 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 TMEM123Q8N131 208 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 LINC00471Q8N535 108 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 OR6X1Q8NH79 312 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 MAGEE2Q8TD90 523 aaPredicted RBP14.36□□□□□ -0.11
SF3A1-209ENST00000496189 TMEM171Q8WVE6 324 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 CANT1Q8WVQ1 401 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 AKAP1Q92667 903 aaKnown RBP eCLIP14.36□□□□□ -0.11
SF3A1-209ENST00000496189 ZNF566Q969W8 418 aa14.36□□□□□ -0.11
SF3A1-209ENST00000496189 BOD1Q96IK1 185 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms