RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	SLC35D2	Q76EJ3	337 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	LINGO2	Q7L985	606 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	SLC46A3	Q7Z3Q1	461 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	NANOGNB	Q7Z5D8	188 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	CCDC36	Q8IYA8	594 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	ZNF611	Q8N823	705 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	OR1K1	Q8NGR3	316 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	OR52N5	Q8NH56	324 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	OR6X1	Q8NH79	312 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	ACOT11	Q8WXI4	607 aa	Predicted RBP	10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	BCL2L2	Q92843	193 aa	Predicted RBP	10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	BPIFA2	Q96DR5	249 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	PYURF	Q96I23	114 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	TXNDC15	Q96J42	360 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	ALKBH3	Q96Q83	286 aa	Predicted RBP	10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	GPR35	Q9HC97	309 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	B3GAT2	Q9NPZ5	323 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	MAN2C1	Q9NTJ4	1040 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	C20orf141	Q9NUB4	165 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	BEX4	Q9NWD9	120 aa	Predicted RBP	10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	MGAT4B	Q9UQ53	548 aa		10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	FAM32A	Q9Y421	112 aa	Known RBP	10.84	□□□□□ -0.67
MRPL55-233	ENST00000495899	ARPC4-TTLL3	A0A0A6YYG9	625 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899		A0A1W2PRQ8	180 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	C11orf98	E9PRG8	122 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	BLOC1S5-TXNDC5	H3BN57	136 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	HS3ST1	O14792	307 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	PRSS23	O95084	383 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	T-ENOL	P0DO92	83 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	IFNGR1	P15260	489 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	ITGA2	P17301	1181 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	RHCE	P18577	417 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	CDH2	P19022	906 aa	Predicted RBP	10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	YAP1	P46937	504 aa	Known RBP	10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	PRKCD	Q05655	676 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	LGALS3BP	Q08380	585 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	DGCR6	Q14129	220 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	TSEN54	Q7Z6J9	526 aa	Known RBP	10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	ALDH16A1	Q8IZ83	802 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	CDK20	Q8IZL9	346 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	FAM169B	Q8N8A8	192 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	FAM156A	Q8NDB6	213 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	RBM15B	Q8NDT2	890 aa	Known RBP	10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	PFN4	Q8NHR9	129 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	BCAS4	Q8TDM0	211 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	SLC25A44	Q96H78	314 aa	Predicted RBP	10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	C7orf34	Q96L11	122 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	NSMCE2	Q96MF7	247 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	EMC6	Q9BV81	110 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	C1orf21	Q9H246	121 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	UBTD1	Q9HAC8	227 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	NMNAT1	Q9HAN9	279 aa	Predicted RBP	10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	CRLF2	Q9HC73	371 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	MED29	Q9NX70	200 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	NPAP1	Q9NZP6	1156 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	NDUFAF4	Q9P032	175 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899	RHCG	Q9UBD6	479 aa		10.83	□□□□□ -0.68
MRPL55-233	ENST00000495899		A0A1W2PRG6	482 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	NPIPB13	A6NJU9	1138 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	CENPBD1	B2RD01	187 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	NPIPB4	C9JG80	1138 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899		J3KTA2	159 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899		M0R3G1	203 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	ARPC2	O15144	300 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	CLOCK	O15516	846 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	BCL10	O95999	233 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	PLAU	P00749	431 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	IFI30	P13284	250 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	SNRPB	P14678	240 aa	Known RBP	10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	CD40	P25942	277 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	MSX2	P35548	267 aa	Predicted RBP	10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	ZNF83	P51522	516 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	BID	P55957	195 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	UBE2N	P61088	152 aa	Known RBP	10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	ARF1	P84077	181 aa	Known RBP	10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	GABPB1	Q06547	395 aa	Predicted RBP	10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	RPL18	Q07020	188 aa	Known RBP	10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	CEACAM16	Q2WEN9	425 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	C3orf36	Q3SXR2	165 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	TBRG1	Q3YBR2	411 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	HIKESHI	Q53FT3	197 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	ZNF730	Q6ZMV8	503 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	MBOAT2	Q6ZWT7	520 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	ZNF627	Q7L945	461 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	RRM2B	Q7LG56	351 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	HDDC2	Q7Z4H3	204 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	OR6N1	Q8NGY5	312 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	LILRB1	Q8NHL6	650 aa	Predicted RBP	10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	AKAP1	Q92667	903 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	POP5	Q969H6	163 aa	Known RBP	10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	ZNF566	Q969W8	418 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	DMRTB1	Q96MA1	342 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	MUC13	Q9H3R2	512 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	STX18	Q9P2W9	335 aa	Known RBP	10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899	HIF3A	Q9Y2N7	669 aa		10.82	□□□□□ -0.68
MRPL55-233	ENST00000495899		A0A087WUU8	490 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899		A0A1W2PR80	420 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	ZNF99	A8MXY4	864 aa	Predicted RBP	10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	ABCD4	O14678	606 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	SERPINI2	O75830	405 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms