RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	GALNT11	Q8NCW6	608 aa		12.06	□□□□□ -0.48
APTX-231	ENST00000494973	ZNF519	Q8TB69	540 aa		12.06	□□□□□ -0.48
APTX-231	ENST00000494973	ZNF566	Q969W8	418 aa		12.06	□□□□□ -0.48
APTX-231	ENST00000494973	TSPAN32	Q96QS1	320 aa		12.06	□□□□□ -0.48
APTX-231	ENST00000494973	TVP23B	Q9NYZ1	205 aa		12.06	□□□□□ -0.48
APTX-231	ENST00000494973	IL20RA	Q9UHF4	553 aa		12.06	□□□□□ -0.48
APTX-231	ENST00000494973	ZNF346	Q9UL40	294 aa	Known RBP	12.06	□□□□□ -0.48
APTX-231	ENST00000494973	NOSIP	Q9Y314	301 aa	Known RBP	12.06	□□□□□ -0.48
APTX-231	ENST00000494973	ADAM18	Q9Y3Q7	739 aa		12.06	□□□□□ -0.48
APTX-231	ENST00000494973	ZNF814	B7Z6K7	855 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973		E9PLN8	166 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	SLC43A1	O75387	559 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	MRPL33	O75394	65 aa	Known RBP	12.05	□□□□□ -0.48
APTX-231	ENST00000494973	AQP8	O94778	261 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	IGFBP1	P08833	259 aa	Predicted RBP	12.05	□□□□□ -0.48
APTX-231	ENST00000494973	CRABP1	P29762	137 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	POLR2I	P36954	125 aa	Known RBP	12.05	□□□□□ -0.48
APTX-231	ENST00000494973	BLVRA	P53004	296 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	BID	P55957	195 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	CLDN17	P56750	224 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	CLRN1	P58418	232 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	SNRPG	P62308	76 aa	Known RBP	12.05	□□□□□ -0.48
APTX-231	ENST00000494973	IL5RA	Q01344	420 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	12.05	□□□□□ -0.48
APTX-231	ENST00000494973	LGALS3BP	Q08380	585 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	MED21	Q13503	144 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	STK11	Q15831	433 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	C6orf52	Q5T4I8	152 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	RIPPLY2	Q5TAB7	128 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	MTFR2	Q6P444	385 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	RPTN	Q6XPR3	784 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	PTCHD4	Q6ZW05	846 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	USP51	Q70EK9	711 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	AAED1	Q7RTV5	226 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	GID4	Q8IVV7	300 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	KDM8	Q8N371	416 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	IQCF1	Q8N6M8	205 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	POMGNT2	Q8NAT1	580 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	NOXO1	Q8NFA2	376 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	OR52E2	Q8NGJ4	325 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	TMEM163	Q8TC26	289 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	RFK	Q969G6	155 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	LRR1	Q96L50	414 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973		Q96M85	177 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	RBP7	Q96R05	134 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	VKORC1	Q9BQB6	163 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	SFXN3	Q9BWM7	321 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	ASB6	Q9NWX5	421 aa		12.05	□□□□□ -0.48
APTX-231	ENST00000494973	PRSS37	A4D1T9	235 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	HSPB2	A8KAH6	182 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973		B8ZZF3	427 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	PRR23D1	E9PI22	279 aa	Predicted RBP	12.04	□□□□□ -0.48
APTX-231	ENST00000494973	ARHGEF9	O43307	516 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	DENR	O43583	198 aa	Known RBP	12.04	□□□□□ -0.48
APTX-231	ENST00000494973	RAMP1	O60894	148 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	CNOT4	O95628	575 aa	Known RBP	12.04	□□□□□ -0.48
APTX-231	ENST00000494973	TGM6	O95932	706 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	PRR23D2	P0DMB1	279 aa	Predicted RBP	12.04	□□□□□ -0.48
APTX-231	ENST00000494973	HIST1H1C	P16403	213 aa	Known RBP	12.04	□□□□□ -0.48
APTX-231	ENST00000494973	MYF6	P23409	242 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	EPHA2	P29317	976 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	AGTR1	P30556	359 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	CA7	P43166	264 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	SLC25A1	P53007	311 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	CSNK2B	P67870	215 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	TMED1	Q13445	227 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	HSPB2	Q16082	182 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	SLC25A30	Q5SVS4	291 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	THEM4	Q5T1C6	240 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	LCN1P1	Q5VSP4	162 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	TMEM236	Q5W0B7	351 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	ACSM5	Q6NUN0	579 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	NIPAL3	Q6P499	406 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	FAM214B	Q7L5A3	538 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	THAP5	Q7Z6K1	395 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	DOLPP1	Q86YN1	238 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	FAM26E	Q8N5C1	309 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	OR6K3	Q8NGY3	331 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	OR2T4	Q8NH00	348 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	APH1A	Q96BI3	265 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	LINC00470	Q9BZP3	86 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	ENKD1	Q9H0I2	346 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	CLN6	Q9NWW5	311 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	MED29	Q9NX70	200 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	VSX1	Q9NZR4	365 aa	Predicted RBP	12.04	□□□□□ -0.48
APTX-231	ENST00000494973	H2AFY2	Q9P0M6	372 aa	Predicted RBP	12.04	□□□□□ -0.48
APTX-231	ENST00000494973	FAM215A	Q9Y5M1	114 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	ZGRF1	Q86YA3	2104 aa		12.04	□□□□□ -0.48
APTX-231	ENST00000494973	TRGV8	A0A0C4DH27	118 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973		A0A1B0GUH1	482 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	SH3D21	A4FU49	640 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	SLC35F4	A4IF30	521 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	PRODH	O43272	600 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	WISP2	O76076	250 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	IL18BP	O95998	194 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	STS	P08842	583 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	TMIGD3	P0DMS9	266 aa	Predicted RBP	12.03	□□□□□ -0.48
APTX-231	ENST00000494973	HLA-DOB	P13765	273 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	CSNK1A1	P48729	337 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	CD47	Q08722	323 aa		12.03	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms