RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 EIF3HO15372 352 aaKnown RBP eCLIP3.52□□□□□ -1.85
GTF3A-208ENST00000493903 NVLO15381 856 aaKnown RBP3.52□□□□□ -1.85
GTF3A-208ENST00000493903 SERPINE2P07093 398 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 UBTFL1P0CB47 393 aaPredicted RBP3.52□□□□□ -1.85
GTF3A-208ENST00000493903 IDSP22304 550 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 SLC1A1P43005 524 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 KIR2DS2P43631 304 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 TFPI2P48307 235 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 CCNHP51946 323 aaPredicted RBP3.52□□□□□ -1.85
GTF3A-208ENST00000493903 CCNG1P51959 295 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 ERVPABLB-1P60509 514 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 ERVK11-1P61568 191 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 LMO4P61968 165 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 IRF8Q02556 426 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 MECOMQ03112 1051 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 RAD51Q06609 339 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 SLC10A1Q14973 349 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 C2CD6Q53TS8 623 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 OR5M10Q6IEU7 315 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 STXBP4Q6ZWJ1 553 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 KLHDC8BQ8IXV7 354 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 IQCKQ8N0W5 287 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 C8orf31Q8N9H6 132 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 OR1E3Q8WZA6 343 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 TOP1MTQ969P6 601 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 CCDC126Q96EE4 140 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 ART5Q96L15 291 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 ZNF597Q96LX8 424 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 JSRP1Q96MG2 331 aaPredicted RBP3.52□□□□□ -1.85
GTF3A-208ENST00000493903 OPALINQ96PE5 141 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 ATP5SQ99766 215 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 SH3GL1Q99961 368 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 BARHL1Q9BZE3 327 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 FBXO44Q9H4M3 255 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 ZNF696Q9H7X3 374 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 DPM3Q9P2X0 92 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 ZMAT5Q9UDW3 170 aaKnown RBP3.52□□□□□ -1.85
GTF3A-208ENST00000493903 COL14A1Q05707 1796 aaKnown RBP3.52□□□□□ -1.85
GTF3A-208ENST00000493903 RRBP1Q9P2E9 1410 aaKnown RBP3.52□□□□□ -1.85
GTF3A-208ENST00000493903 CASZ1Q86V15 1759 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 LOC100506127A0A0U1RQW1 187 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 EFCAB7A8K855 629 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 DCTN6O00399 190 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 YKT6O15498 198 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 NOL4O94818 638 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 ERLIN2O94905 339 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 TSPAN13O95857 204 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 MBP02144 154 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 STSP08842 583 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 LAMP1P11279 417 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 NPR2P20594 1047 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 PTNP21246 168 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 HTR1FP30939 366 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 TMED10P49755 219 aaKnown RBP3.51□□□□□ -1.85
GTF3A-208ENST00000493903 ELAVL2Q12926 359 aaKnown RBP3.51□□□□□ -1.85
GTF3A-208ENST00000493903 CYLC2Q14093 348 aaPredicted RBP3.51□□□□□ -1.85
GTF3A-208ENST00000493903 FAM83EQ2M2I3 478 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 Q3ZCU0 254 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 SAMD4BQ5PRF9 694 aaKnown RBP3.51□□□□□ -1.85
GTF3A-208ENST00000493903 LY6G6FQ5SQ64 297 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 OR2G6Q5TZ20 316 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 MLIPQ5VWP3 458 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 TTC23LQ6PF05 361 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 HDDC2Q7Z4H3 204 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 C17orf82Q86X59 251 aaPredicted RBP3.51□□□□□ -1.85
GTF3A-208ENST00000493903 IQCF2Q8IXL9 164 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 NRMQ8IXM6 262 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 MS4A15Q8N5U1 240 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 PROKR2Q8NFJ6 384 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 OR5T3Q8NGG3 340 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 CERS2Q96G23 380 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 PAGE5Q96GU1 130 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 MSANTD3Q96H12 275 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 NAF1Q96HR8 494 aaKnown RBP3.51□□□□□ -1.85
GTF3A-208ENST00000493903 XPO6Q96QU8 1125 aaKnown RBP3.51□□□□□ -1.85
GTF3A-208ENST00000493903 PSMB7Q99436 277 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 CHIAQ9BZP6 476 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 NMUR2Q9GZQ4 415 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 OR51M1Q9H341 326 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 UGT1A10Q9HAW8 530 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 PXMP2Q9NR77 195 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 ASIC3Q9UHC3 531 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 MUTYHQ9UIF7 546 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 MMP24Q9Y5R2 645 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 PIK3C2GO75747 1445 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 RGPD3A6NKT7 1758 aaPredicted RBP3.51□□□□□ -1.85
GTF3A-208ENST00000493903 RGPD8O14715 1765 aaPredicted RBP3.51□□□□□ -1.85
GTF3A-208ENST00000493903 RGPD4Q7Z3J3 1758 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 NRKQ7Z2Y5 1582 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 ARHGEF10O15013 1369 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 ABCC11Q96J66 1382 aa3.51□□□□□ -1.85
GTF3A-208ENST00000493903 CDHR2Q9BYE9 1310 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 MYOM1P52179 1685 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 SMIM28A0A1B0GU29 152 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 DHRS7CA6NNS2 312 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 EPM2AB3EWF7 344 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 E9PAM4 449 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 TEX46H3BTG2 121 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 CCL21O00585 134 aa3.5□□□□□ -1.85
GTF3A-208ENST00000493903 GOSR2O14653 212 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms