RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 PLPP3O14495 311 aa20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 ERCC1P07992 297 aaPredicted RBP20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 THBS4P35443 961 aa20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 NR4A2P43354 598 aa20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 GZMKP49863 264 aa20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 SNTB2Q13425 540 aaKnown RBP20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 CAMK2DQ13557 499 aa20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 NPTX1Q15818 432 aa20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 GSG1Q2KHT4 349 aa20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 ENTPD8Q5MY95 495 aa20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 INTS11Q5TA45 600 aaKnown RBP20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 ZNF813Q6ZN06 617 aa20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 VANGL1Q8TAA9 524 aaPredicted RBP20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 SLC26A7Q8TE54 656 aa20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 TXNDC15Q96J42 360 aa20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 RAB1BQ9H0U4 201 aa20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 KAT8Q9H7Z6 458 aaKnown RBP20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 NOX3Q9HBY0 568 aa20.51■□□□□ 0.87
RHBDD3-206ENST00000493894 ATRQ13535 2644 aa20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 OR6A2O95222 327 aa20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 HLA-HP01893 362 aa20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 VIMP08670 466 aaKnown RBP20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 ADORA3P0DMS8 318 aa20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 CD79AP11912 226 aa20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 B4GALT1P15291 398 aa20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 PCGF2P35227 344 aa20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 CSNK1A1P48729 337 aa20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 DAG1Q14118 895 aa20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 TTC33Q6PID6 262 aaPredicted RBP20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 LINC00114Q6XXX2 140 aa20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 ZNF627Q7L945 461 aa20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 SPATA21Q7Z572 469 aa20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 SVOPLQ8N434 492 aa20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 SPATA3Q8NHX4 192 aa20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 ADAMTS16Q8TE57 1224 aa20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 B3GNT2Q9NY97 397 aa20.5■□□□□ 0.87
RHBDD3-206ENST00000493894 FBN1P35555 2871 aaKnown RBP20.49■□□□□ 0.87
RHBDD3-206ENST00000493894 C11orf98E9PRG8 122 aa20.49■□□□□ 0.87
RHBDD3-206ENST00000493894 FAM157CP0CG43 387 aa20.49■□□□□ 0.87
RHBDD3-206ENST00000493894 METTL21CQ5VZV1 264 aa20.49■□□□□ 0.87
RHBDD3-206ENST00000493894 KRT80Q6KB66 452 aa20.49■□□□□ 0.87
RHBDD3-206ENST00000493894 NHLRC1Q6VVB1 395 aa20.49■□□□□ 0.87
RHBDD3-206ENST00000493894 OR10A6Q8NH74 314 aa20.49■□□□□ 0.87
RHBDD3-206ENST00000493894 RASSF5Q8WWW0 418 aa20.49■□□□□ 0.87
RHBDD3-206ENST00000493894 TAMM41Q96BW9 452 aa20.49■□□□□ 0.87
RHBDD3-206ENST00000493894 FOXB1Q99853 325 aa20.49■□□□□ 0.87
RHBDD3-206ENST00000493894 DYNLRB1Q9NP97 96 aa20.49■□□□□ 0.87
RHBDD3-206ENST00000493894 LPAR3Q9UBY5 353 aa20.49■□□□□ 0.87
RHBDD3-206ENST00000493894 SLC7A7Q9UM01 511 aa20.49■□□□□ 0.87
RHBDD3-206ENST00000493894 YLPM1P49750 1951 aaKnown RBP20.48■□□□□ 0.87
RHBDD3-206ENST00000493894 TRAPPC13A5PLN9 417 aa20.48■□□□□ 0.87
RHBDD3-206ENST00000493894 IFNGR1P15260 489 aa20.48■□□□□ 0.87
RHBDD3-206ENST00000493894 CD247P20963 164 aa20.48■□□□□ 0.87
RHBDD3-206ENST00000493894 BIDP55957 195 aa20.48■□□□□ 0.87
RHBDD3-206ENST00000493894 ZNF74Q16587 644 aa20.48■□□□□ 0.87
RHBDD3-206ENST00000493894 TRMT5Q32P41 509 aaKnown RBP20.48■□□□□ 0.87
RHBDD3-206ENST00000493894 WDR88Q6ZMY6 472 aa20.48■□□□□ 0.87
RHBDD3-206ENST00000493894 RBM45Q8IUH3 476 aaKnown RBP20.48■□□□□ 0.87
RHBDD3-206ENST00000493894 WDFY1Q8IWB7 410 aa20.48■□□□□ 0.87
RHBDD3-206ENST00000493894 ZNF540Q8NDQ6 660 aa20.48■□□□□ 0.87
RHBDD3-206ENST00000493894 OR4D11Q8NGI4 311 aa20.48■□□□□ 0.87
RHBDD3-206ENST00000493894 MPP4Q96JB8 637 aa20.48■□□□□ 0.87
RHBDD3-206ENST00000493894 FOXN4Q96NZ1 517 aa20.48■□□□□ 0.87
RHBDD3-206ENST00000493894 BEX2Q9BXY8 128 aa20.48■□□□□ 0.87
RHBDD3-206ENST00000493894 NANSQ9NR45 359 aa20.48■□□□□ 0.87
RHBDD3-206ENST00000493894 KPNA4O00629 521 aaPredicted RBP20.47■□□□□ 0.87
RHBDD3-206ENST00000493894 RAB36O95755 333 aa20.47■□□□□ 0.87
RHBDD3-206ENST00000493894 CH25HO95992 272 aa20.47■□□□□ 0.87
RHBDD3-206ENST00000493894 APEHP13798 732 aaKnown RBP20.47■□□□□ 0.87
RHBDD3-206ENST00000493894 VMACQ2NL98 169 aa20.47■□□□□ 0.87
RHBDD3-206ENST00000493894 IQCCQ4KMZ1 466 aa20.47■□□□□ 0.87
RHBDD3-206ENST00000493894 SLC35D2Q76EJ3 337 aa20.47■□□□□ 0.87
RHBDD3-206ENST00000493894 NEU4Q8WWR8 484 aaPredicted RBP20.47■□□□□ 0.87
RHBDD3-206ENST00000493894 DOK1Q99704 481 aa20.47■□□□□ 0.87
RHBDD3-206ENST00000493894 SLC19A3Q9BZV2 496 aa20.47■□□□□ 0.87
RHBDD3-206ENST00000493894 BPESC1Q9GZL8 116 aa20.47■□□□□ 0.87
RHBDD3-206ENST00000493894 SHARPINQ9H0F6 387 aa20.47■□□□□ 0.87
RHBDD3-206ENST00000493894 PCDHAC1Q9H158 963 aa20.47■□□□□ 0.87
RHBDD3-206ENST00000493894 DENND2DQ9H6A0 471 aaPredicted RBP20.47■□□□□ 0.87
RHBDD3-206ENST00000493894 KCNS2Q9ULS6 477 aa20.47■□□□□ 0.87
RHBDD3-206ENST00000493894 CMAHPQ9Y471 501 aa20.47■□□□□ 0.87
RHBDD3-206ENST00000493894 LMX1BO60663 402 aa20.46■□□□□ 0.87
RHBDD3-206ENST00000493894 UBL3O95164 117 aa20.46■□□□□ 0.87
RHBDD3-206ENST00000493894 LYPD3O95274 346 aa20.46■□□□□ 0.87
RHBDD3-206ENST00000493894 THY1P04216 161 aa20.46■□□□□ 0.87
RHBDD3-206ENST00000493894 ZNF14P17017 642 aaPredicted RBP20.46■□□□□ 0.87
RHBDD3-206ENST00000493894 NR4A1P22736 598 aa20.46■□□□□ 0.87
RHBDD3-206ENST00000493894 PTDSS1P48651 473 aaKnown RBP20.46■□□□□ 0.87
RHBDD3-206ENST00000493894 PIGFQ07326 219 aa20.46■□□□□ 0.87
RHBDD3-206ENST00000493894 FAM166AQ6J272 317 aa20.46■□□□□ 0.87
RHBDD3-206ENST00000493894 OR6X1Q8NH79 312 aa20.46■□□□□ 0.87
RHBDD3-206ENST00000493894 MS4A3Q96HJ5 214 aa20.46■□□□□ 0.87
RHBDD3-206ENST00000493894 TMEM120AQ9BXJ8 343 aa20.46■□□□□ 0.87
RHBDD3-206ENST00000493894 ZNF229Q9UJW7 825 aa20.46■□□□□ 0.87
RHBDD3-206ENST00000493894 FBXL3Q9UKT7 428 aa20.46■□□□□ 0.87
RHBDD3-206ENST00000493894 SPEF1Q9Y4P9 236 aa20.46■□□□□ 0.87
RHBDD3-206ENST00000493894 COL6A5A8TX70 2615 aa20.45■□□□□ 0.86
RHBDD3-206ENST00000493894 IGHV4-61A0A0C4DH41 118 aa20.45■□□□□ 0.86
RHBDD3-206ENST00000493894 RNF212BA8MTL3 300 aa20.45■□□□□ 0.86
RHBDD3-206ENST00000493894 RNF13O43567 381 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms