RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 SNTB2Q13425 540 aaKnown RBP12.68□□□□□ -0.38
ATG4B-223ENST00000493618 EFNB3Q15768 340 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 ZNF613Q6PF04 617 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 LINC00114Q6XXX2 140 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 ZNF813Q6ZN06 617 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 TSPYL5Q86VY4 417 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-223ENST00000493618 ARIH2OSQ8N7S6 290 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 FAM169BQ8N8A8 192 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 NUP37Q8NFH4 326 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 OR5J2Q8NH18 312 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 OR10A6Q8NH74 314 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 MS4A3Q96HJ5 214 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 ULBP2Q9BZM5 246 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 KAT8Q9H7Z6 458 aaKnown RBP12.68□□□□□ -0.38
ATG4B-223ENST00000493618 B3GAT2Q9NPZ5 323 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 SLC7A7Q9UM01 511 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 NOX1Q9Y5S8 564 aa12.68□□□□□ -0.38
ATG4B-223ENST00000493618 FBP2O00757 339 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 CHP2O43745 196 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 PDE5AO76074 875 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 OR6A2O95222 327 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 IFNGR1P15260 489 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 PCGF2P35227 344 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 NR4A2P43354 598 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 DAG1Q14118 895 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 MELKQ14680 651 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 GSG1Q2KHT4 349 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 SWT1Q5T5J6 900 aaKnown RBP12.67□□□□□ -0.38
ATG4B-223ENST00000493618 TTC33Q6PID6 262 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-223ENST00000493618 IL17RELQ6ZVW7 336 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 CDK20Q8IZL9 346 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 LRRC17Q8N6Y2 441 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 SLC26A7Q8TE54 656 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 ADAMTS16Q8TE57 1224 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 TMEM120AQ9BXJ8 343 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 EVA1AQ9H8M9 152 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 B3GNT2Q9NY97 397 aa12.67□□□□□ -0.38
ATG4B-223ENST00000493618 IGHV4-61A0A0C4DH41 118 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 TMEM129A0AVI4 362 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 FMO6PO60774 539 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 C8BP07358 591 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 PATE4P0C8F1 98 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 TNFRSF1BP20333 461 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 PTDSS1P48651 473 aaKnown RBP12.66□□□□□ -0.38
ATG4B-223ENST00000493618 CSNK1A1P48729 337 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 PPOXP50336 477 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 GZMMP51124 257 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 ZNF74Q16587 644 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 IQCCQ4KMZ1 466 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 PODNL1Q6PEZ8 512 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 PXKQ7Z7A4 578 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 PATL1Q86TB9 770 aaKnown RBP12.66□□□□□ -0.38
ATG4B-223ENST00000493618 STON2Q8WXE9 905 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 LRR1Q96L50 414 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 DOK1Q99704 481 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 FOXB1Q99853 325 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 RAB1BQ9H0U4 201 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 TPK1Q9H3S4 243 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 ZNF442Q9H7R0 627 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 VIPAS39Q9H9C1 493 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 CHODLQ9H9P2 273 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 MOV10Q9HCE1 1003 aaKnown RBP12.66□□□□□ -0.38
ATG4B-223ENST00000493618 DYNLRB1Q9NP97 96 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 ZNF224Q9NZL3 707 aa12.66□□□□□ -0.38
ATG4B-223ENST00000493618 LOC390937A0A1W2PQ73 354 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 TRAPPC13A5PLN9 417 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 RNF212BA8MTL3 300 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 NDUFS8O00217 210 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 RNF13O43567 381 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 SHOX2O60902 331 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-223ENST00000493618 SASH3O75995 380 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 MT-ATP6P00846 226 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 IFNA2P01563 188 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 ADRA2AP08913 450 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 UMPSP11172 480 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 APEHP13798 732 aaKnown RBP12.65□□□□□ -0.38
ATG4B-223ENST00000493618 DAOP14920 347 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 H2AFXP16104 143 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-223ENST00000493618 CRYBA2P53672 197 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 MSMPQ1L6U9 139 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 VMACQ2NL98 169 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 RABL3Q5HYI8 236 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 NANOGP8Q6NSW7 305 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 SLC35D2Q76EJ3 337 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 SLC30A8Q8IWU4 369 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 CCDC36Q8IYA8 594 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 FGFBP3Q8TAT2 258 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 TMEM54Q969K7 222 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 ZNF75AQ96N20 296 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 REPIN1Q9BWE0 567 aaKnown RBP12.65□□□□□ -0.38
ATG4B-223ENST00000493618 BEX2Q9BXY8 128 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 BPESC1Q9GZL8 116 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 NANOGQ9H9S0 305 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 NANSQ9NR45 359 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 ARGLU1Q9NWB6 273 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-223ENST00000493618 TAS2R5Q9NYW4 299 aa12.65□□□□□ -0.38
ATG4B-223ENST00000493618 LOC100289279A0A1B0GTE1 492 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 VSTM5A8MXK1 200 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 LYNX1G3V0Z9 82 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 LMX1BO60663 402 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms