RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 GNALP38405 381 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 MAGEA2P43356 314 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 ASCL1P50553 236 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 SORDQ00796 357 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 ST3GAL3Q11203 375 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 ZP4Q12836 540 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 DGCR6Q14129 220 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 MS4A18Q3C1V0 323 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 IFI44LQ53G44 452 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 LCN8Q6JVE9 175 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 ZNF474Q6S9Z5 364 aaPredicted RBP5.96□□□□□ -1.46
VPS52-219ENST00000493379 PLXDC2Q6UX71 529 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 VTCN1Q7Z7D3 282 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 TUSC5Q8IXB3 177 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 OFCC1Q8IZS5 231 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 CADM2Q8N3J6 435 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 SCAIQ8N9R8 606 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 FAM156AQ8NDB6 213 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 PIK3C3Q8NEB9 887 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 WFDC11Q8NEX6 87 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 OR10Q1Q8NGQ4 319 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 PIGXQ8TBF5 258 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 GEMIN6Q8WXD5 167 aaKnown RBP5.96□□□□□ -1.46
VPS52-219ENST00000493379 ROBO4Q8WZ75 1007 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 RNASE6Q93091 150 aaKnown RBP5.96□□□□□ -1.46
VPS52-219ENST00000493379 TAAR8Q969N4 342 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 TMEM45BQ96B21 275 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 ASB9Q96DX5 294 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 KTI12Q96EK9 354 aaPredicted RBP5.96□□□□□ -1.46
VPS52-219ENST00000493379 PYURFQ96I23 114 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 C18orf12Q96KH6 178 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 PRRC1Q96M27 445 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 EPYCQ99645 322 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 BTBD10Q9BSF8 475 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 NAA11Q9BSU3 229 aaPredicted RBP5.96□□□□□ -1.46
VPS52-219ENST00000493379 UCK2Q9BZX2 261 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 TMEM185BQ9H7F4 350 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 IL1RAPQ9NPH3 570 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 MEPEQ9NQ76 525 aaPredicted RBP5.96□□□□□ -1.46
VPS52-219ENST00000493379 MAN2C1Q9NTJ4 1040 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 NDUFAF4Q9P032 175 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 KLHL13Q9P2N7 655 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 RIMS3Q9UJD0 308 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 SLC13A4Q9UKG4 626 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 PACSIN3Q9UKS6 424 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 SAMD4AQ9UPU9 718 aaKnown RBP5.96□□□□□ -1.46
VPS52-219ENST00000493379 SNX13Q9Y5W8 968 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 ENPP4Q9Y6X5 453 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 DOCK7Q96N67 2140 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 CHD3Q12873 2000 aaKnown RBP5.96□□□□□ -1.46
VPS52-219ENST00000493379 BIRC6Q9NR09 4857 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 ARHGAP21Q5T5U3 1957 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 KIAA1549Q9HCM3 1950 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 MED12LQ86YW9 2145 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 AQP12BA6NM10 295 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 ARPC2O15144 300 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 ZNF432O94892 652 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 GOSR1O95249 250 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 MT-ND1P03886 318 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 IFNW1P05000 195 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 ASAH2BP0C7U1 165 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 NCK1P16333 377 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 RHCEP18577 417 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 TCEA1P23193 301 aaKnown RBP5.95□□□□□ -1.46
VPS52-219ENST00000493379 AGTR1P30556 359 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 IDUAP35475 653 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 OR1E2P47887 323 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 OR3A2P47893 321 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 LIMS1P48059 325 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 RASSF2P50749 326 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 CTBP2P56545 445 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 VLDLRP98155 873 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 RASGEF1BQ0VAM2 473 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 FHL1Q13642 323 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 ODF1Q14990 250 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 DAZAP2Q15038 168 aaPredicted RBP5.95□□□□□ -1.46
VPS52-219ENST00000493379 DNAL1Q4LDG9 190 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 LRRC23Q53EV4 343 aaPredicted RBP5.95□□□□□ -1.46
VPS52-219ENST00000493379 VWA1Q6PCB0 445 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 H1FNTQ75WM6 255 aaPredicted RBP5.95□□□□□ -1.46
VPS52-219ENST00000493379 ASRGL1Q7L266 308 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 P4HA3Q7Z4N8 544 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 PXKQ7Z7A4 578 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 NKAIN4Q8IVV8 208 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 AQP12AQ8IXF9 295 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 GABRG1Q8N1C3 465 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 INTS1Q8N201 2190 aaKnown RBP5.95□□□□□ -1.46
VPS52-219ENST00000493379 RNF148Q8N7C7 305 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 FAM86B1Q8N7N1 296 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 TMEM99Q8N816 258 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 PAPD5Q8NDF8 572 aaKnown RBP5.95□□□□□ -1.46
VPS52-219ENST00000493379 ABHD3Q8WU67 409 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 SMPDL3BQ92485 455 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 ZHX1-C8orf76Q96EF9 292 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 NSMCE2Q96MF7 247 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 OXGR1Q96P68 337 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 ZNF300Q96RE9 604 aaPredicted RBP5.95□□□□□ -1.46
VPS52-219ENST00000493379 MAGIXQ9H6Y5 334 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 FKRPQ9H9S5 495 aa5.95□□□□□ -1.46
VPS52-219ENST00000493379 NMNAT1Q9HAN9 279 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms