RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 AIG1Q9NVV5 245 aa9.42□□□□□ -0.9
SNRNP200-207ENST00000493271 SLCO1C1Q9NYB5 712 aa9.42□□□□□ -0.9
SNRNP200-207ENST00000493271 PKD1L1Q8TDX9 2849 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 LOC105371242A0A075B767 164 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 ZNF726A6NNF4 738 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 C17orf100A8MU93 164 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 TMPRSS2O15393 492 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 ITM2AO43736 263 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 RRP9O43818 475 aaKnown RBP9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 SEC14L2O76054 403 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 ANP32DO95626 131 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 SERPINA5P05154 406 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 NQO1P15559 274 aaKnown RBP9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 GRPRP30550 384 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 CDKN2CP42773 168 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 CRYBB2P43320 205 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 GIPRP48546 466 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 MVDP53602 400 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 SEC24CP53992 1094 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 UFM1P61960 85 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 CHI3L2Q15782 390 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 MSMPQ1L6U9 139 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 DCAF12L2Q5VW00 463 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 FAM91A1Q658Y4 838 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 RGS7BPQ6MZT1 257 aaPredicted RBP9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 TMEM154Q6P9G4 183 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 RBMS3Q6XE24 437 aaKnown RBP9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 C1orf229Q6ZS94 237 aaPredicted RBP9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 MSANTD1Q6ZTZ1 278 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 CARM1Q86X55 608 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 CLIP4Q8N3C7 705 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 OR6N1Q8NGY5 312 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 SLC41A3Q96GZ6 507 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 TIMD4Q96H15 378 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 TMEM19Q96HH6 336 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 TEX37Q96LM6 180 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 ASPNQ9BXN1 380 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 TMPRSS13Q9BYE2 586 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 NUF2Q9BZD4 464 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 RAD21L1Q9H4I0 556 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 RMND5AQ9H871 391 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 DUSP13Q9UII6 198 aa9.41□□□□□ -0.9
SNRNP200-207ENST00000493271 IGLV3-9A0A075B6K5 115 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 PPIAL4EA0A075B759 164 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 A0A087WUJ7 227 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 PPIAL4CA0A0B4J2A2 164 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 CLDN25C9JDP6 229 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 PPIAL4DF5H284 164 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 WNT9BO14905 357 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 PLPP2O43688 288 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 MGRN1O60291 552 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 RGS9O75916 674 aaPredicted RBP9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 NCR1O76036 304 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 PTHP01270 115 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 C1QCP02747 245 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 PPIAL4FP0DN26 164 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 HKR1P10072 659 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 NAT2P11245 290 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 ETFAP13804 333 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 B4GALT1P15291 398 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 ADRA2CP18825 462 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 PRKAR1BP31321 381 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 SLC1A6P48664 564 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 KLF3P57682 345 aaPredicted RBP9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 UBA52P62987 128 aaKnown RBP9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 PIGFQ07326 219 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 PUDPQ08623 228 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 MAD2L1BPQ15013 274 aaPredicted RBP9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 PDLIM3Q53GG5 364 aaPredicted RBP9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 ALG10BQ5I7T1 473 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 ULK3Q6PHR2 472 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 PXKQ7Z7A4 578 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 RETREG3Q86VR2 466 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 LRRC17Q8N6Y2 441 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 ZDHHC22Q8N966 263 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 BBS10Q8TAM1 723 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 RAB1CQ92928 201 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 TAAR8Q969N4 342 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 BCL2L14Q9BZR8 327 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 EVA1AQ9H8M9 152 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 TPT1P8Q9HAU6 139 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 SSU72Q9NP77 194 aaKnown RBP9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 HINT3Q9NQE9 182 aaKnown RBP9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 SELENONQ9NZV5 590 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 KLHL14Q9P2G3 628 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 SEC14L4Q9UDX3 406 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 CHST2Q9Y4C5 530 aa9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 V9GYY5 206 aaPredicted RBP9.4□□□□□ -0.9
SNRNP200-207ENST00000493271 IGHV1-69-2A0A0G2JMI3 117 aa9.39□□□□□ -0.91
SNRNP200-207ENST00000493271 POM121CA8CG34 1229 aa9.39□□□□□ -0.91
SNRNP200-207ENST00000493271 MS4A18H0YCH9 400 aa9.39□□□□□ -0.91
SNRNP200-207ENST00000493271 TM9SF1O15321 606 aa9.39□□□□□ -0.91
SNRNP200-207ENST00000493271 DEAF1O75398 565 aaPredicted RBP9.39□□□□□ -0.91
SNRNP200-207ENST00000493271 FARS2O95363 451 aaKnown RBP9.39□□□□□ -0.91
SNRNP200-207ENST00000493271 SNAP29O95721 258 aa9.39□□□□□ -0.91
SNRNP200-207ENST00000493271 AVPP01185 164 aa9.39□□□□□ -0.91
SNRNP200-207ENST00000493271 IGHV2-5P01817 119 aa9.39□□□□□ -0.91
SNRNP200-207ENST00000493271 ALDOCP09972 364 aaKnown RBP9.39□□□□□ -0.91
SNRNP200-207ENST00000493271 BMP2P12643 396 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms