RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TFF3Q07654 80 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 GINS1Q14691 196 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 TMEM236Q5W0B7 351 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 GTF2IRD2BQ6EKJ0 949 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 ABLIM2Q6H8Q1 611 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 SLC27A4Q6P1M0 643 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 DPY19L2P2Q6ZN68 376 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 GTF2IRD2Q86UP8 949 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 DMRTC2Q8IXT2 367 aaPredicted RBP11.93□□□□□ -0.5
MSH6-208ENST00000493177 SLC43A2Q8N370 569 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 NAXEQ8NCW5 288 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 OR2T33Q8NG76 320 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 OR9K2Q8NGE7 335 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 OR8D4Q8NGM9 314 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 MBD3L2Q8NHZ7 208 aaPredicted RBP11.93□□□□□ -0.5
MSH6-208ENST00000493177 ABHD3Q8WU67 409 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 LURAP1Q96LR2 239 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 MBOAT4Q96T53 435 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 TM9SF2Q99805 663 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 KATNB1Q9BVA0 655 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 TEX12Q9BXU0 123 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 KLHL9Q9P2J3 617 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 CLCF1Q9UBD9 225 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 ZNF629Q9UEG4 869 aaPredicted RBP11.93□□□□□ -0.5
MSH6-208ENST00000493177 CLEC4AQ9UMR7 237 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 NOX1Q9Y5S8 564 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 IER3IP1Q9Y5U9 82 aa11.93□□□□□ -0.5
MSH6-208ENST00000493177 PKDREJQ9NTG1 2253 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 TGM6O95932 706 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 BCL10O95999 233 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 CD14P08571 375 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 TSPAN19P0C672 248 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 HLA-DOBP13765 273 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 CEACAM8P31997 349 aaPredicted RBP11.92□□□□□ -0.5
MSH6-208ENST00000493177 PEX19P40855 299 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 SNTB1Q13884 538 aaKnown RBP11.92□□□□□ -0.5
MSH6-208ENST00000493177 MELKQ14680 651 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 PTGES3Q15185 160 aaKnown RBP11.92□□□□□ -0.5
MSH6-208ENST00000493177 RNPS1Q15287 305 aaKnown RBP11.92□□□□□ -0.5
MSH6-208ENST00000493177 PGGHGQ32M88 737 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 SLC35D2Q76EJ3 337 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 PXKQ7Z7A4 578 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 ZNF295-AS1Q8N0V1 137 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 DHRSXQ8N5I4 330 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 LRRC75AQ8NAA5 344 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 C9orf106Q8NAJ2 232 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 RELL2Q8NC24 303 aaPredicted RBP11.92□□□□□ -0.5
MSH6-208ENST00000493177 OR4Q3Q8NH05 313 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 RNF128Q8TEB7 428 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 ZNF775Q96BV0 537 aaPredicted RBP11.92□□□□□ -0.5
MSH6-208ENST00000493177 INTS12Q96CB8 462 aaKnown RBP11.92□□□□□ -0.5
MSH6-208ENST00000493177 ZFP3Q96NJ6 502 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 ERMAPQ96PL5 475 aaPredicted RBP11.92□□□□□ -0.5
MSH6-208ENST00000493177 SF3B5Q9BWJ5 86 aaKnown RBP11.92□□□□□ -0.5
MSH6-208ENST00000493177 B3GAT1Q9P2W7 334 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 GRHPRQ9UBQ7 328 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 ITGB1BP2Q9UKP3 347 aa11.92□□□□□ -0.5
MSH6-208ENST00000493177 ZNF346Q9UL40 294 aaKnown RBP11.92□□□□□ -0.5
MSH6-208ENST00000493177 ZNF726A6NNF4 738 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 H0YJX3 145 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 DLGAP1O14490 977 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 IFNGR1P15260 489 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 EPHA2P29317 976 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 ACVR1BP36896 505 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 KIR2DL3P43628 341 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 GIPRP48546 466 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 HSPA13P48723 471 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 DAP3P51398 398 aaKnown RBP11.91□□□□□ -0.5
MSH6-208ENST00000493177 CLDN17P56750 224 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 MYBPC1Q00872 1141 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 SLC17A1Q14916 467 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 POU4F3Q15319 338 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 ACKR1Q16570 336 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 SLC35F1Q5T1Q4 408 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 TTC23Q5W5X9 447 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 CASP12Q6UXS9 341 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 ADGRE4PQ86SQ3 457 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 GCNT2Q8N0V5 402 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 RNASE6Q93091 150 aaKnown RBP11.91□□□□□ -0.5
MSH6-208ENST00000493177 WNT2BQ93097 391 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 PLEKHA8Q96JA3 519 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 TSPAN32Q96QS1 320 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 GPX7Q96SL4 187 aaPredicted RBP11.91□□□□□ -0.5
MSH6-208ENST00000493177 ADI1Q9BV57 179 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 PRRG3Q9BZD7 231 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 GRIP2Q9C0E4 1043 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 SLC25A19Q9HC21 320 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 FAM118AQ9NWS6 357 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 MED29Q9NX70 200 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 TVP23BQ9NYZ1 205 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 EMC3Q9P0I2 261 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 KCNN3Q9UGI6 736 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 FOXD3Q9UJU5 478 aaPredicted RBP11.91□□□□□ -0.5
MSH6-208ENST00000493177 BAIAP2Q9UQB8 552 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 ADAM18Q9Y3Q7 739 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 GMPPBQ9Y5P6 360 aa11.91□□□□□ -0.5
MSH6-208ENST00000493177 MED12LQ86YW9 2145 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 TEX13CA0A0J9YWL9 993 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 LOC100130705A0A1B0GUX0 176 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 LOC102725191A0A1B0GVB3 256 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms