RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 MSMPQ1L6U9 139 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 PDLIM3Q53GG5 364 aaPredicted RBP12.42□□□□□ -0.42
SSR4-212ENST00000491833 BLOC1S3Q6QNY0 202 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 ZNF836Q6ZNA1 936 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 C1QL2Q7Z5L3 287 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 CCDC197Q8NCU1 140 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 PIK3C3Q8NEB9 887 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 MFSD8Q8NHS3 518 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 STK35Q8TDR2 534 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 SLC25A36Q96CQ1 311 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 SYT3Q9BQG1 590 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 ZNF696Q9H7X3 374 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 SLC52A3Q9NQ40 469 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 RLIMQ9NVW2 624 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 NDUFAF1Q9Y375 327 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 PCDHGB1Q9Y5G3 927 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 TMEM247A6NEH6 219 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 BBIP1A8MTZ0 92 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 FTCDNL1E5RQL4 147 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 WNT9BO14905 357 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 TMPRSS2O15393 492 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 SHOX2O60902 331 aaPredicted RBP12.41□□□□□ -0.42
SSR4-212ENST00000491833 FAM107AO95990 144 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 C1QCP02747 245 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 ANPEPP15144 967 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 GLRXP35754 106 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 ACAA2P42765 397 aaKnown RBP12.41□□□□□ -0.42
SSR4-212ENST00000491833 LMO4P61968 165 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 MRPS11P82912 194 aaKnown RBP12.41□□□□□ -0.42
SSR4-212ENST00000491833 MYBPC1Q00872 1141 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 GALK2Q01415 458 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 KLF10Q13118 480 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 C1DQ13901 141 aaKnown RBP12.41□□□□□ -0.42
SSR4-212ENST00000491833 NFYCQ13952 458 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 MAD2L1BPQ15013 274 aaPredicted RBP12.41□□□□□ -0.42
SSR4-212ENST00000491833 GSG1Q2KHT4 349 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 TRMT5Q32P41 509 aaKnown RBP12.41□□□□□ -0.42
SSR4-212ENST00000491833 SLC2A7Q6PXP3 512 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 SHISA2Q6UWI4 295 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 C1orf229Q6ZS94 237 aaPredicted RBP12.41□□□□□ -0.42
SSR4-212ENST00000491833 DHDDSQ86SQ9 333 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 SNX32Q86XE0 403 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 VRK2Q86Y07 508 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 KDM8Q8N371 416 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 BPIFB2Q8N4F0 458 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 OR52P1PQ8NH57 321 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 YIPF5Q969M3 257 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 MS4A3Q96HJ5 214 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 CCT8L2Q96SF2 557 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 SLC6A7Q99884 636 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 ZNF385DQ9H6B1 395 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 CACYBPQ9HB71 228 aaKnown RBP12.41□□□□□ -0.42
SSR4-212ENST00000491833 G6PC2Q9NQR9 355 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 SAR1AQ9NR31 198 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 ARMCX1Q9P291 453 aa12.41□□□□□ -0.42
SSR4-212ENST00000491833 ZNF346Q9UL40 294 aaKnown RBP12.41□□□□□ -0.42
SSR4-212ENST00000491833 A0A0G2JMP0 313 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 A0A0X1KG70 313 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 A0A1W2PPW3 197 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 NCR1O76036 304 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 BCL10O95999 233 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 HLA-HP01893 362 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 CD79AP11912 226 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 PPIBP23284 216 aaKnown RBP12.4□□□□□ -0.42
SSR4-212ENST00000491833 RPS5P46782 204 aaKnown RBP12.4□□□□□ -0.42
SSR4-212ENST00000491833 CYLC2Q14093 348 aaPredicted RBP12.4□□□□□ -0.42
SSR4-212ENST00000491833 RNF220Q5VTB9 566 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 ACSM5Q6NUN0 579 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 PCYOX1LQ8NBM8 494 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 OR4M2Q8NGB6 313 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 PNPT1Q8TCS8 783 aaKnown RBP12.4□□□□□ -0.42
SSR4-212ENST00000491833 RAB39BQ96DA2 213 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 ZNF837Q96EG3 531 aaPredicted RBP12.4□□□□□ -0.42
SSR4-212ENST00000491833 OXGR1Q96P68 337 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 OR2M2Q96R28 347 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 ZNF747Q9BV97 191 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 PTDSS2Q9BVG9 487 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 ZNF665Q9H7R5 613 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 B3GAT1Q9P2W7 334 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 P2RX2Q9UBL9 471 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 SEC14L4Q9UDX3 406 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 CORO2BQ9UQ03 480 aa12.4□□□□□ -0.42
SSR4-212ENST00000491833 ZNF443Q9Y2A4 671 aaPredicted RBP12.4□□□□□ -0.42
SSR4-212ENST00000491833 DSPPQ9NZW4 1301 aa12.39□□□□□ -0.43
SSR4-212ENST00000491833 M0R3G1 203 aa12.39□□□□□ -0.43
SSR4-212ENST00000491833 MRASO14807 208 aa12.39□□□□□ -0.43
SSR4-212ENST00000491833 AIM2O14862 343 aa12.39□□□□□ -0.43
SSR4-212ENST00000491833 RP2O75695 350 aa12.39□□□□□ -0.43
SSR4-212ENST00000491833 RAB36O95755 333 aa12.39□□□□□ -0.43
SSR4-212ENST00000491833 AVPP01185 164 aa12.39□□□□□ -0.43
SSR4-212ENST00000491833 ZNF35P13682 527 aa12.39□□□□□ -0.43
SSR4-212ENST00000491833 ZNF14P17017 642 aaPredicted RBP12.39□□□□□ -0.43
SSR4-212ENST00000491833 CDKN2CP42773 168 aa12.39□□□□□ -0.43
SSR4-212ENST00000491833 FOXL1Q12952 345 aa12.39□□□□□ -0.43
SSR4-212ENST00000491833 FUNDC1Q8IVP5 155 aa12.39□□□□□ -0.43
SSR4-212ENST00000491833 TMEM123Q8N131 208 aa12.39□□□□□ -0.43
SSR4-212ENST00000491833 BCAS4Q8TDM0 211 aa12.39□□□□□ -0.43
SSR4-212ENST00000491833 TSPEARQ8WU66 669 aa12.39□□□□□ -0.43
SSR4-212ENST00000491833 TMPRSS13Q9BYE2 586 aa12.39□□□□□ -0.43
SSR4-212ENST00000491833 B3GNT2Q9NY97 397 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms