RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ZP4Q12836 540 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 NPRL3Q12980 569 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 ZNF813Q6ZN06 617 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 SLC35D2Q76EJ3 337 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 SPATA21Q7Z572 469 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 OR4F15Q8NGB8 312 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 POM121Q96HA1 1249 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 HOPXQ9BPY8 73 aaPredicted RBP15.2■□□□□ 0.02
SEC13-218ENST00000490283 RHNO1Q9BSD3 238 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 ZNF426Q9BUY5 554 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 NELFAQ9H3P2 528 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 EFCAB1Q9HAE3 211 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 RIMS3Q9UJD0 308 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 RNF223E7ERA6 249 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 H7C417 338 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 SHOX2O60902 331 aaPredicted RBP15.19■□□□□ 0.02
SEC13-218ENST00000490283 NDUFS7O75251 213 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 SEC14L2O76054 403 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 IGKV3-15P01624 115 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 IGLV1-44P01699 117 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 MT-ND1P03886 318 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 CD79AP11912 226 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 OR1E2P47887 323 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 IDH3GP51553 393 aaPredicted RBP15.19■□□□□ 0.02
SEC13-218ENST00000490283 DSCR9P59020 149 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 SNRPD2P62316 118 aaKnown RBP15.19■□□□□ 0.02
SEC13-218ENST00000490283 CLEC2AQ6UVW9 174 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 HDDC2Q7Z4H3 204 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 IL17RDQ8NFM7 739 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 OR6X1Q8NH79 312 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 TMEM239Q8WW34 195 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 ZNF566Q969W8 418 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 FBXO17Q96EF6 278 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 ZNF837Q96EG3 531 aaPredicted RBP15.19■□□□□ 0.02
SEC13-218ENST00000490283 SGTBQ96EQ0 304 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 REG4Q9BYZ8 158 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 MED31Q9Y3C7 131 aa15.19■□□□□ 0.02
SEC13-218ENST00000490283 A0A1W2PRG6 482 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 MCIDASD6RGH6 385 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 BLOC1S5-TXNDC5H3BN57 136 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 BCL10O95999 233 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 TP53P04637 393 aaPredicted RBP15.18■□□□□ 0.02
SEC13-218ENST00000490283 SELENOWP63302 87 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 PPP2R2BQ00005 443 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 LIPEQ05469 1076 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 ST3GAL3Q11203 375 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 PIN1Q13526 163 aaPredicted RBP15.18■□□□□ 0.02
SEC13-218ENST00000490283 GSG1Q2KHT4 349 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 PHYHD1Q5SRE7 291 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 VHLLQ6RSH7 139 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 MDP1Q86V88 176 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 TSPYL5Q86VY4 417 aaPredicted RBP15.18■□□□□ 0.02
SEC13-218ENST00000490283 LRRC17Q8N6Y2 441 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 TMEM255BQ8WV15 326 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 CMTM5Q96DZ9 223 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 FOXB1Q99853 325 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 ELAC2Q9BQ52 826 aaKnown RBP15.18■□□□□ 0.02
SEC13-218ENST00000490283 PRSS27Q9BQR3 290 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 FAM107BQ9H098 131 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 CA10Q9NS85 328 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 CMTM6Q9NX76 183 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 TAS2R5Q9NYW4 299 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 FKBP7Q9Y680 259 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 VPS13CQ709C8 3753 aa15.18■□□□□ 0.02
SEC13-218ENST00000490283 PDE5AO76074 875 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 OR7A10O76100 309 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 RAB36O95755 333 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 ZNF682O95780 498 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 IGF2P01344 180 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 IGHG1P01857 330 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 ASAH2BP0C7U1 165 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 B4GALT1P15291 398 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 HOXB4P17483 251 aaPredicted RBP15.17■□□□□ 0.02
SEC13-218ENST00000490283 FUT1P19526 365 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 SERPINF1P36955 418 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 NUDT2P50583 147 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 SLC7A2P52569 658 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 MELKQ14680 651 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 SLC46A3Q7Z3Q1 461 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 NKAIN4Q8IVV8 208 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 SLC15A3Q8IY34 581 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 PFN4Q8NHR9 129 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 SLC25A44Q96H78 314 aaPredicted RBP15.17■□□□□ 0.02
SEC13-218ENST00000490283 PRRC1Q96M27 445 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 DENND2DQ9H6A0 471 aaPredicted RBP15.17■□□□□ 0.02
SEC13-218ENST00000490283 MEPEQ9NQ76 525 aaPredicted RBP15.17■□□□□ 0.02
SEC13-218ENST00000490283 GLTPQ9NZD2 209 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 STX18Q9P2W9 335 aaKnown RBP15.17■□□□□ 0.02
SEC13-218ENST00000490283 FBXO9Q9UK97 447 aaPredicted RBP15.17■□□□□ 0.02
SEC13-218ENST00000490283 FBXL3Q9UKT7 428 aa15.17■□□□□ 0.02
SEC13-218ENST00000490283 HTR3EA5X5Y0 456 aa15.16■□□□□ 0.02
SEC13-218ENST00000490283 B9A039 149 aa15.16■□□□□ 0.02
SEC13-218ENST00000490283 CXCR6O00574 342 aa15.16■□□□□ 0.02
SEC13-218ENST00000490283 UBL3O95164 117 aa15.16■□□□□ 0.02
SEC13-218ENST00000490283 FARS2O95363 451 aaKnown RBP15.16■□□□□ 0.02
SEC13-218ENST00000490283 HLA-HP01893 362 aa15.16■□□□□ 0.02
SEC13-218ENST00000490283 IFNW1P05000 195 aa15.16■□□□□ 0.02
SEC13-218ENST00000490283 CSF3P09919 207 aa15.16■□□□□ 0.02
SEC13-218ENST00000490283 DAP3P51398 398 aaKnown RBP15.16■□□□□ 0.02
SEC13-218ENST00000490283 EFNA4P52798 201 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms