RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 GPR4P46093 362 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 MAP2K6P52564 334 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 CSNK2A1P68400 391 aaPredicted RBP9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 KEAP1Q14145 624 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 POU4F3Q15319 338 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 ZNF74Q16587 644 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 KCTD21Q4G0X4 260 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 SYT14P1Q58G82 188 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 OTUD3Q5T2D3 398 aaPredicted RBP9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 C1orf140Q5VVS0 124 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 KLHL17Q6TDP4 642 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 CD300LDQ6UXZ3 194 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 STAC2Q6ZMT1 411 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 LINC00471Q8N535 108 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 LRRC17Q8N6Y2 441 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 AQP11Q8NBQ7 271 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 PIGXQ8TBF5 258 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 CYGBQ8WWM9 190 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 BPIFA2Q96DR5 249 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 OR5B2Q96R09 309 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 SEC14L4Q9UDX3 406 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 TMCC3Q9ULS5 477 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 GPR52Q9Y2T5 361 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 MED31Q9Y3C7 131 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 HSPE1-MOB4S4R3N1 261 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 F8P00451 2351 aa9.36□□□□□ -0.91
SCAMP4-208ENST00000489554 TRAV36DV7A0A075B6V5 113 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 LIPT2A6NK58 231 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 DEFB108AA8MXU0 73 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 PTP4A3O75365 173 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 OR7A10O76100 309 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 ATE1O95260 518 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 ADAP00813 363 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 YES1P07947 543 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 IGFBP1P08833 259 aaPredicted RBP9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 ASAH2BP0C7U1 165 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 IFI30P13284 250 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 ANXA8P13928 327 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 KLK2P20151 261 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 PSMB1P20618 241 aaKnown RBP9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 EPHA2P29317 976 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 TTKP33981 857 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 RPS5P46782 204 aaKnown RBP9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 CLK1P49759 484 aaKnown RBP9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 DIO1P49895 249 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 P2RY4P51582 365 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 NR1H2P55055 460 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 ESRRGP62508 458 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 RPS4XP62701 263 aaKnown RBP9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 TSPAN31Q12999 210 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 TFAP2EQ6VUC0 442 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 TMPPEQ6ZT21 453 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 TUSC5Q8IXB3 177 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 C8orf59Q8N0T1 100 aaPredicted RBP9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 OR8D4Q8NGM9 314 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 OR6S1Q8NH40 331 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 RNF217Q8TC41 542 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 GTPBP3Q969Y2 492 aaKnown RBP9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 DNAJA3Q96EY1 480 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 MBOAT4Q96T53 435 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 HDHD5Q9BXW7 423 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 POTEKPQ9BYX7 375 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 C12orf49Q9H741 205 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 BCO1Q9HAY6 547 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 VCX3AQ9NNX9 186 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 SELENONQ9NZV5 590 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 MGAT4BQ9UQ53 548 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 HDGFL3Q9Y3E1 203 aa9.35□□□□□ -0.91
SCAMP4-208ENST00000489554 IGHV3-15A0A0B4J1V0 119 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 DPPA5A6NC42 116 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 ZNF724A8MTY0 619 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 ZNF814B7Z6K7 855 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 SULT2B1O00204 365 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 SMAD9O15198 467 aaKnown RBP9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 SIAH2O43255 324 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 DNPH1O43598 174 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 CYTIPO60759 359 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 PMS2P2O95744 297 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 CH25HO95992 272 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 TFPIP10646 304 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 POLR2IP36954 125 aaKnown RBP9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 CSNK2BP67870 215 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 ADARB1P78563 741 aaKnown RBP9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 RASGEF1BQ0VAM2 473 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 DEFB113Q30KQ7 82 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 BEX5Q5H9J7 111 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 RBM48Q5RL73 367 aaKnown RBP9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 FAM69AQ5T7M9 428 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 C5orf46Q6UWT4 87 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 NHLRC1Q6VVB1 395 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 NUFIP2Q7Z417 695 aaKnown RBP9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 THAP5Q7Z6K1 395 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 PARP8Q8N3A8 854 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 STEAP2Q8NFT2 490 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 TSPAN14Q8NG11 270 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 OR13C2Q8NGS9 318 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 MFSD8Q8NHS3 518 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 GNPDA2Q8TDQ7 276 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 DDIT4LQ96D03 193 aa9.34□□□□□ -0.91
SCAMP4-208ENST00000489554 ZHX1-C8orf76Q96EF9 292 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms