RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 CDCA3Q99618 268 aaPredicted RBP16.26■□□□□ 0.19
NPHP4-209ENST00000489180 OCSTAMPQ9BR26 566 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 TRAPPC2LQ9UL33 140 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 SNRPGP62308 76 aaKnown RBP16.25■□□□□ 0.19
NPHP4-209ENST00000489180 ZFP82Q8N141 532 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 TMEM217Q8N7C4 229 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 MRPL38Q96DV4 380 aaKnown RBP16.25■□□□□ 0.19
NPHP4-209ENST00000489180 CGGBP1Q9UFW8 167 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-209ENST00000489180 NUMA1Q14980 2115 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 F10P00742 488 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 ATP1B1P05026 303 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 ABHD17CQ6PCB6 329 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 CLEC1AQ8NC01 280 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 OR5L1Q8NGL2 311 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 TTLL8A6PVC2 850 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 KRBOX1C9JBD0 128 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 S100A11P31949 105 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 NPY4RP50391 375 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 SYT14P1Q58G82 188 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 YOD1Q5VVQ6 348 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-209ENST00000489180 ARSGQ96EG1 525 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 NIPAL2Q9H841 368 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 FAM212BQ9NTI7 297 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-209ENST00000489180 IGLV3-10A0A075B6K4 115 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 SCGB1D1O95968 90 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 RPA2P15927 270 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 ABOP16442 354 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 ELK1P19419 428 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 IGFBP6P24592 240 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-209ENST00000489180 PIGTQ969N2 578 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 TNFRSF12AQ9NP84 129 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 HSFX1Q9UBD0 423 aa16.25■□□□□ 0.19
NPHP4-209ENST00000489180 PLSCR5A0PG75 271 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 E9PI62 339 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 OR52N1Q8NH53 320 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 SLC25A46Q96AG3 418 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 CRYBG1Q9Y4K1 1723 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 SYT5O00445 386 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 ICMTO60725 284 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 SLC2A10O95528 541 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 ADAMTSL4Q6UY14 1074 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 DMBX1Q8NFW5 382 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 FAM234AQ9H0X4 552 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 ACER3Q9NUN7 267 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 KCNK2O95069 426 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 PDGFAP04085 211 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 SCGB2A2Q13296 93 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 OGFOD3Q6PK18 319 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 KCNG3Q8TAE7 436 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 LCORQ96JN0 433 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-209ENST00000489180 ACOXLQ9NUZ1 547 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 GNG13Q9P2W3 67 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 SERPINF1P36955 418 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 DDOSTP39656 456 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 SLC19A1P41440 591 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 PDLIM3Q53GG5 364 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-209ENST00000489180 TCEAL7Q9BRU2 100 aa16.24■□□□□ 0.19
NPHP4-209ENST00000489180 GPR55Q9Y2T6 319 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-209ENST00000489180 ZNF728P0DKX0 622 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 ZNF93P35789 620 aaPredicted RBP16.23■□□□□ 0.19
NPHP4-209ENST00000489180 GPR176Q14439 515 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 OPN5Q6U736 354 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 ADGRF3Q8IZF5 1079 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 EID2Q8N6I1 236 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 TMEM99Q8N816 258 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 OR51S1Q8NGJ8 323 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 NRSN2Q9GZP1 204 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 CHST2Q9Y4C5 530 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 LOC100289279A0A1B0GTE1 492 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 SLC5A10A0PJK1 596 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 D6RAR5 112 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 HOXA9P31269 272 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 PGFP49763 221 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 TAS2R30P59541 319 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 PMPCAQ10713 525 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 ESCO2Q56NI9 601 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 PAN3Q58A45 887 aaKnown RBP16.23■□□□□ 0.19
NPHP4-209ENST00000489180 TMUB2Q71RG4 321 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 BATF2Q8N1L9 274 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 SLC22A24Q8N4F4 322 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 SUMF1Q8NBK3 374 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 SLC25A37Q9NYZ2 338 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 SLC35A2P78381 396 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 MFAP5Q13361 173 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 RNLSQ5VYX0 342 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 KCNIP4Q6PIL6 250 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 AAED1Q7RTV5 226 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 CPEB2Q7Z5Q1 589 aaKnown RBP16.23■□□□□ 0.19
NPHP4-209ENST00000489180 ADIPOR2Q86V24 386 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 OR10R2Q8NGX6 335 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 RGPD1P0DJD0 1748 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 MCRIP1C9JLW8 97 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 PHF1O43189 567 aaPredicted RBP16.23■□□□□ 0.19
NPHP4-209ENST00000489180 GPX5O75715 221 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 KITLGP21583 273 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 CSNK1EP49674 416 aaKnown RBP16.23■□□□□ 0.19
NPHP4-209ENST00000489180 LIM2P55344 173 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 MSMO1Q15800 293 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 DCXRQ7Z4W1 244 aa16.23■□□□□ 0.19
NPHP4-209ENST00000489180 MSI2Q96DH6 328 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms