RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 ZNF74Q16587 644 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 CARD17Q5XLA6 110 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 TUBA1AQ71U36 451 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 ARPINQ7Z6K5 226 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 CARM1Q86X55 608 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 RBM45Q8IUH3 476 aaKnown RBP12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 IL17RDQ8NFM7 739 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 OR4D11Q8NGI4 311 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 OR6N1Q8NGY5 312 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 NANOS1Q8WY41 292 aaKnown RBP12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 LRRC37BQ96QE4 947 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 ZNF426Q9BUY5 554 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 EMC6Q9BV81 110 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 ULBP2Q9BZM5 246 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 CA10Q9NS85 328 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 MED29Q9NX70 200 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 POFUT2Q9Y2G5 429 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 SH3GLB1Q9Y371 365 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 FKBP7Q9Y680 259 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 ARFGEF3Q5TH69 2177 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 LOC100653049A0A140TA62 436 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 VSTM5A8MXK1 200 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 C11orf98E9PRG8 122 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 KPNA4O00629 521 aaPredicted RBP12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 RNF13O43567 381 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 KRT34O76011 436 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 LYPD3O95274 346 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 CH25HO95992 272 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 HIST1H2ABP04908 130 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 UMPSP11172 480 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 RBM34P42696 430 aaKnown RBP12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 CSNK1A1P48729 337 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 IDH3GP51553 393 aaPredicted RBP12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 CRYBA2P53672 197 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 TAS2R41P59536 307 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 ZP4Q12836 540 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 CAMK2DQ13557 499 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 WDR88Q6ZMY6 472 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 HIST3H2AQ7L7L0 130 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 ZNF627Q7L945 461 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 NANOGNBQ7Z5D8 188 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 OR2T12Q8NG77 320 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 HIST1H2ACQ93077 130 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 FBXO17Q96EF6 278 aa12.01□□□□□ -0.49
SPTLC1-207ENST00000488921 ZANQ9Y493 2812 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 B9A039 149 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 SEC14L2O76054 403 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 OR5F1O95221 314 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 IGF2P01344 180 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 THY1P04216 161 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 THRBP10828 461 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 IFNGR1P15260 489 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 SLC25A16P16260 332 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 PCSK6P29122 969 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 IFNA8P32881 189 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 EFNA4P52798 201 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 BIDP55957 195 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 NPRL3Q12980 569 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 SWI5Q1ZZU3 235 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 GSG1Q2KHT4 349 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 LRRC23Q53EV4 343 aaPredicted RBP12□□□□□ -0.49
SPTLC1-207ENST00000488921 PHYHD1Q5SRE7 291 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 ZNF813Q6ZN06 617 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 DEF8Q6ZN54 512 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 SLC35D2Q76EJ3 337 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 HDDC2Q7Z4H3 204 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 MDP1Q86V88 176 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 NUP37Q8NFH4 326 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 OR6X1Q8NH79 312 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 RP9Q8TA86 221 aaKnown RBP12□□□□□ -0.49
SPTLC1-207ENST00000488921 LZICQ8WZA0 190 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 ZNF837Q96EG3 531 aaPredicted RBP12□□□□□ -0.49
SPTLC1-207ENST00000488921 TXNDC15Q96J42 360 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 ZNF583Q96ND8 569 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 DENND2DQ9H6A0 471 aaPredicted RBP12□□□□□ -0.49
SPTLC1-207ENST00000488921 ZNF442Q9H7R0 627 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 FBXL3Q9UKT7 428 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 HIVEP2P31629 2446 aa12□□□□□ -0.49
SPTLC1-207ENST00000488921 CHD3Q12873 2000 aaKnown RBP11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 IGHV4-30-2A0A087WSY4 118 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 ELOVL7A1L3X0 281 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 INAFM1C9JVW0 142 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 UBL3O95164 117 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 MT-ND1P03886 318 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 ASAH2BP0C7U1 165 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 CALCRP30988 508 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 SERPINF1P36955 418 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 EFNB3Q15768 340 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 CYBRD1Q53TN4 286 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 NHLRC1Q6VVB1 395 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 SLC46A3Q7Z3Q1 461 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 TSPYL5Q86VY4 417 aaPredicted RBP11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 MICU2Q8IYU8 434 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 MAPK1IP1LQ8NDC0 245 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 OR10H5Q8NGA6 315 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 FAM168AQ92567 244 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 ZNF566Q969W8 418 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 RCN3Q96D15 328 aa11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 SLC25A44Q96H78 314 aaPredicted RBP11.99□□□□□ -0.49
SPTLC1-207ENST00000488921 FOXB1Q99853 325 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms