RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 ANKS4BQ8N8V4 417 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 LRRC58Q96CX6 371 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 SORCS2Q96PQ0 1159 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 TNFRSF13CQ96RJ3 184 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 MDFIQ99750 246 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 ECSITQ9BQ95 431 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 ULBP2Q9BZM5 246 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 B3GAT2Q9NPZ5 323 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 FGFR1OP2Q9NVK5 253 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 B3GNT2Q9NY97 397 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 TAS2R5Q9NYW4 299 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 USP22Q9UPT9 525 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 PLCE1Q9P212 2302 aa10.35□□□□□ -0.75
CCHCR1-215ENST00000488920 IGHV2OR16-5A0A0B4J2B6 119 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 LOC100653049A0A140TA62 436 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 A8MV72 311 aaPredicted RBP10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 B9A039 149 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 MRASO14807 208 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 KRT34O76011 436 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 HIST1H2ABP04908 130 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 VIMP08670 466 aaKnown RBP10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 B4GALT1P15291 398 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 SLC25A16P16260 332 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 TNFRSF1BP20333 461 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 LOXL1Q08397 574 aaPredicted RBP10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 EFNB3Q15768 340 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 CARTPTQ16568 116 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 CGB2Q6NT52 195 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 SLC35D2Q76EJ3 337 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 CCDC80Q76M96 950 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 HIST3H2AQ7L7L0 130 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 CALHM3Q86XJ0 350 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 NUP37Q8NFH4 326 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 PROX1Q92786 737 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 HIST1H2ACQ93077 130 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 MS4A3Q96HJ5 214 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 SH3GL1Q99961 368 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 PLK3Q9H4B4 646 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 NOX3Q9HBY0 568 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 SAR1AQ9NR31 198 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 NANSQ9NR45 359 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 SH3GLB1Q9Y371 365 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 FKBP7Q9Y680 259 aa10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 ANK3Q12955 4377 aaKnown RBP10.34□□□□□ -0.75
CCHCR1-215ENST00000488920 SH3PXD2BA1X283 911 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 VSTM5A8MXK1 200 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 hCG_2039718K7EN88 272 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 FXYD1O00168 92 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 RNF13O43567 381 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 SHOX2O60902 331 aaPredicted RBP10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 PDE5AO76074 875 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 CSF3P09919 207 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 PATE4P0C8F1 98 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 UMPSP11172 480 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 NPR2P20594 1047 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 USF1P22415 310 aaPredicted RBP10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 CSNK1A1P48729 337 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 PDLIM4P50479 330 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 ZP4Q12836 540 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 GSG1Q2KHT4 349 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 REP15Q6BDI9 236 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 KRT80Q6KB66 452 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 SPATA21Q7Z572 469 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 CARM1Q86X55 608 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 SNX32Q86XE0 403 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 HIPK1Q86Z02 1210 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 ZCCHC24Q8N2G6 241 aaKnown RBP10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 SVOPLQ8N434 492 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 IL17RDQ8NFM7 739 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 OR8J3Q8NGG0 315 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 OR6X1Q8NH79 312 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 C10orf82Q8WW14 230 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 RASSF5Q8WWW0 418 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 MPP4Q96JB8 637 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 ZNF583Q96ND8 569 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 FOXN4Q96NZ1 517 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 DOK1Q99704 481 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 PRSS27Q9BQR3 290 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 PCDHAC1Q9H158 963 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 ZNF442Q9H7R0 627 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 ZNF446Q9NWS9 450 aa10.33□□□□□ -0.76
CCHCR1-215ENST00000488920 SONP18583 2426 aaKnown RBP10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 TMEM129A0AVI4 362 aa10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 BLOC1S5-TXNDC5H3BN57 136 aa10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 NPPAP01160 153 aa10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 ASAH2BP0C7U1 165 aa10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 NR4A1P22736 598 aa10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 NR4A2P43354 598 aa10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 OR1E2P47887 323 aa10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 GIPRP48546 466 aa10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 PTDSS1P48651 473 aaKnown RBP10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 RAB1AP62820 205 aa10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 LSM11P83369 360 aaKnown RBP eCLIP10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 VLDLRP98155 873 aa10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 GUCY1A3Q02108 690 aa10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 SNTB2Q13425 540 aaKnown RBP10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 DAG1Q14118 895 aa10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 GGTLC2Q14390 218 aa10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 MELKQ14680 651 aa10.32□□□□□ -0.76
CCHCR1-215ENST00000488920 COQ5Q5HYK3 327 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms