RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 MREGQ8N565 214 aa2.22□□□□□ -2.05
PTPN4-212ENST00000488896 SYT14Q8NB59 555 aa2.22□□□□□ -2.05
PTPN4-212ENST00000488896 OR10G4Q8NGN3 311 aa2.22□□□□□ -2.05
PTPN4-212ENST00000488896 SDR42E1Q8WUS8 393 aa2.22□□□□□ -2.05
PTPN4-212ENST00000488896 CLCC1Q96S66 551 aa2.22□□□□□ -2.05
PTPN4-212ENST00000488896 CHAC1Q9BUX1 264 aa2.22□□□□□ -2.05
PTPN4-212ENST00000488896 LAMP5Q9UJQ1 280 aa2.22□□□□□ -2.05
PTPN4-212ENST00000488896 RPH3ALQ9UNE2 315 aa2.22□□□□□ -2.05
PTPN4-212ENST00000488896 PACSIN2Q9UNF0 486 aaPredicted RBP2.22□□□□□ -2.05
PTPN4-212ENST00000488896 TIMM10BQ9Y5J6 103 aa2.22□□□□□ -2.05
PTPN4-212ENST00000488896 DHX57Q6P158 1386 aaKnown RBP2.22□□□□□ -2.05
PTPN4-212ENST00000488896 ATP8B3O60423 1300 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 IGLV3-22A0A075B6J6 115 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 IGKV3D-11A0A0A0MRZ8 115 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 H0YHG0 523 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 SGK1O00141 431 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 SMIM10L1P0DMW3 83 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 EPB41P11171 864 aaKnown RBP2.21□□□□□ -2.06
PTPN4-212ENST00000488896 ESRRGP62508 458 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 ERVK-25P63136 954 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 RPS21P63220 83 aaKnown RBP2.21□□□□□ -2.06
PTPN4-212ENST00000488896 ERCC8Q13216 396 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 OR5I1Q13606 314 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 SMIM10Q96HG1 83 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 WFIKKN1Q96NZ8 548 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 TSSK3Q96PN8 268 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 PLA2G12AQ9BZM1 189 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 UGT1A7Q9HAW7 530 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 UGT1A10Q9HAW8 530 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 UGT1A8Q9HAW9 530 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 C12orf10Q9HB07 376 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 LY9Q9HBG7 655 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 MCCC2Q9HCC0 563 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 TMEM14AQ9Y6G1 99 aa2.21□□□□□ -2.06
PTPN4-212ENST00000488896 HSD17B6O14756 317 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 MED7O43513 233 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 CBR3O75828 277 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 GABARAPO95166 117 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 GAPDHP04406 335 aaKnown RBP2.2□□□□□ -2.06
PTPN4-212ENST00000488896 ATP6V1C1P21283 382 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 SLC2A5P22732 501 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 LAP3P28838 519 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 RORAP35398 523 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 RPL13AP40429 203 aaKnown RBP2.2□□□□□ -2.06
PTPN4-212ENST00000488896 BPIFB3P59826 476 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 MESDQ14696 234 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 TPD52L1Q16890 204 aaPredicted RBP2.2□□□□□ -2.06
PTPN4-212ENST00000488896 C1orf220Q5T0J3 134 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 RAET1LQ5VY80 246 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 UTS2BQ765I0 119 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 WDR86Q86TI4 376 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 ECHDC2Q86YB7 292 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 TMEM123Q8N131 208 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 CCDC110Q8TBZ0 833 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 UBE2E3Q969T4 207 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 SGK3Q96BR1 496 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 CXorf40BQ96DE9 158 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 NEURL3Q96EH8 262 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 TGM7Q96PF1 710 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 MRPL47Q9HD33 250 aaKnown RBP2.2□□□□□ -2.06
PTPN4-212ENST00000488896 KCNIP3Q9Y2W7 256 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 CEMIPQ8WUJ3 1361 aa2.2□□□□□ -2.06
PTPN4-212ENST00000488896 COL27A1Q8IZC6 1860 aaPredicted RBP2.2□□□□□ -2.06
PTPN4-212ENST00000488896 TUBGCP6Q96RT7 1819 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 GPATCH8Q9UKJ3 1502 aaKnown RBP2.19□□□□□ -2.06
PTPN4-212ENST00000488896 IGKV1D-13A0A0B4J2D9 117 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 CCDC182A6NF36 153 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 RAD51BO15315 384 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 TOM1O60784 492 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 IGKV1-13P0DP09 117 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 CD34P28906 385 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 CD86P42081 329 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 RGS4P49798 205 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 MEF2BQ02080 365 aaPredicted RBP2.19□□□□□ -2.06
PTPN4-212ENST00000488896 PIANPQ8IYJ0 282 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 STPG2Q8N412 459 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 L3HYPDHQ96EM0 354 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 MED8Q96G25 268 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 LRRN3Q9H3W5 708 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 COQ10BQ9H8M1 238 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 MSH6P52701 1360 aa2.19□□□□□ -2.06
PTPN4-212ENST00000488896 COL5A1P20908 1838 aaPredicted RBP2.19□□□□□ -2.06
PTPN4-212ENST00000488896 IGHV5-10-1A0A0J9YXX1 117 aa2.18□□□□□ -2.06
PTPN4-212ENST00000488896 A0A1B0GVI7 797 aa2.18□□□□□ -2.06
PTPN4-212ENST00000488896 RGSL1A5PLK6 1076 aa2.18□□□□□ -2.06
PTPN4-212ENST00000488896 OR5B21A6NL26 309 aa2.18□□□□□ -2.06
PTPN4-212ENST00000488896 SLC25A14O95258 325 aaPredicted RBP2.18□□□□□ -2.06
PTPN4-212ENST00000488896 HSMCR30P0CW71 290 aa2.18□□□□□ -2.06
PTPN4-212ENST00000488896 FOLR1P15328 257 aa2.18□□□□□ -2.06
PTPN4-212ENST00000488896 TCN1P20061 433 aaPredicted RBP2.18□□□□□ -2.06
PTPN4-212ENST00000488896 DRD5P21918 477 aa2.18□□□□□ -2.06
PTPN4-212ENST00000488896 CHI3L1P36222 383 aaPredicted RBP2.18□□□□□ -2.06
PTPN4-212ENST00000488896 CX3CR1P49238 355 aa2.18□□□□□ -2.06
PTPN4-212ENST00000488896 SUB1P53999 127 aaKnown RBP eCLIP2.18□□□□□ -2.06
PTPN4-212ENST00000488896 HTD2P86397 168 aa2.18□□□□□ -2.06
PTPN4-212ENST00000488896 PITPNAQ00169 270 aa2.18□□□□□ -2.06
PTPN4-212ENST00000488896 SCRN3Q0VDG4 424 aa2.18□□□□□ -2.06
PTPN4-212ENST00000488896 GINS1Q14691 196 aa2.18□□□□□ -2.06
PTPN4-212ENST00000488896 DPYSL2Q16555 572 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms