RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 TACR3P29371 465 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 UQCRFS1P47985 274 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 MTNR1AP48039 350 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 ETV1P50549 477 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 CLDN18P56856 261 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 IFITM3Q01628 133 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 OR1Q1Q15612 314 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 EMC4Q5J8M3 183 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 ZNF554Q86TJ5 538 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 GALNT11Q8NCW6 608 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 C3orf49Q96BT1 292 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 SARAFQ96BY9 339 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 ZNF559Q9BR84 538 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 POLEQ07864 2286 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 A0A1B0GWA3 101 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 H0YC42 278 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 LINC01387J3KSC0 135 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 OPN1LWP04000 364 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 PEPDP12955 493 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 ABOP16442 354 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 CPEP16870 476 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 ZNF708P17019 499 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 ETV6P41212 452 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 CRYBB2P43320 205 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 WNT4P56705 351 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 ZNF45Q02386 682 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 TRIM16LQ309B1 348 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 ZNF613Q6PF04 617 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 PAQR6Q6TCH4 344 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 ADGRG3Q86Y34 549 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 PHC2Q8IXK0 858 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 OR2T33Q8NG76 320 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 OR5M9Q8NGP3 310 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 FAM57AQ8TBR7 257 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 SMPDL3BQ92485 455 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 RELTQ969Z4 430 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 WDYHV1Q96HA8 205 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 TRIM2Q9C040 744 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 C6orf62Q9GZU0 229 aaPredicted RBP17.35■□□□□ 0.37
CCM2-216ENST00000488727 DAPK2Q9UIK4 370 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 TMEM5Q9Y2B1 443 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 MPDZO75970 2070 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 UNC119BA6NIH7 251 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 POU3F2P20265 443 aaPredicted RBP17.35■□□□□ 0.37
CCM2-216ENST00000488727 SHC1P29353 583 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 S100A5P33763 92 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 APOBEC1P41238 236 aaKnown RBP17.35■□□□□ 0.37
CCM2-216ENST00000488727 SUCLG1P53597 346 aaKnown RBP17.35■□□□□ 0.37
CCM2-216ENST00000488727 CLDN15P56746 228 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 CLDN20P56880 219 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 RPS3AP61247 264 aaKnown RBP17.35■□□□□ 0.37
CCM2-216ENST00000488727 CLEC12AQ5QGZ9 265 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 GGNQ86UU5 652 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 PRDM14Q9GZV8 571 aa17.35■□□□□ 0.37
CCM2-216ENST00000488727 CHCHD3Q9NX63 227 aaKnown RBP17.35■□□□□ 0.37
CCM2-216ENST00000488727 TMED7-TICAM2A0A0A6YYA0 188 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 A0A0B4J2E0 115 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 A0A1B0GX12 115 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 ISPDA4D126 451 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 ZNF670-ZNF695F2Z2N8 137 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 CDC42EP2O14613 210 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 TPOP07202 933 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 GNLYP22749 145 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 HTR3AP46098 478 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 POLR2HP52434 150 aaKnown RBP17.34■□□□□ 0.37
CCM2-216ENST00000488727 CDH11P55287 796 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 RAC1P63000 192 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 RBPJQ06330 500 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 SELENBP1Q13228 472 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 GXYLT1Q4G148 440 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 NXNL2Q5VZ03 156 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 RPL13AP3Q6NVV1 102 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 WDR88Q6ZMY6 472 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 ATG4DQ86TL0 474 aaPredicted RBP17.34■□□□□ 0.37
CCM2-216ENST00000488727 CD163Q86VB7 1156 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 UBQLNLQ8IYU4 475 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 TMEM239Q8WW34 195 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 JAM3Q9BX67 310 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 RHBDL2Q9NX52 303 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 CHRNA9Q9UGM1 479 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 EXOGQ9Y2C4 368 aaKnown RBP17.34■□□□□ 0.37
CCM2-216ENST00000488727 GPR52Q9Y2T5 361 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 TMED7Q9Y3B3 224 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 ESPL1Q14674 2120 aa17.34■□□□□ 0.37
CCM2-216ENST00000488727 PYCARD-AS1I3L0S3 204 aa17.33■□□□□ 0.37
CCM2-216ENST00000488727 SEC14L5O43304 696 aa17.33■□□□□ 0.37
CCM2-216ENST00000488727 CPN1P15169 458 aa17.33■□□□□ 0.37
CCM2-216ENST00000488727 SFTPDP35247 375 aa17.33■□□□□ 0.37
CCM2-216ENST00000488727 SRYQ05066 204 aa17.33■□□□□ 0.37
CCM2-216ENST00000488727 ZNF181Q2M3W8 571 aa17.33■□□□□ 0.37
CCM2-216ENST00000488727 C3orf33Q6P1S2 294 aa17.33■□□□□ 0.37
CCM2-216ENST00000488727 TMPRSS11FQ6ZWK6 438 aa17.33■□□□□ 0.37
CCM2-216ENST00000488727 ATP6V1C2Q8NEY4 427 aa17.33■□□□□ 0.37
CCM2-216ENST00000488727 ASPNQ9BXN1 380 aa17.33■□□□□ 0.37
CCM2-216ENST00000488727 FN3KQ9H479 309 aa17.33■□□□□ 0.37
CCM2-216ENST00000488727 TMEM27Q9HBJ8 222 aa17.33■□□□□ 0.37
CCM2-216ENST00000488727 RPS6KB2Q9UBS0 482 aa17.33■□□□□ 0.37
CCM2-216ENST00000488727 TINAGQ9UJW2 476 aa17.33■□□□□ 0.37
CCM2-216ENST00000488727 SSR3Q9UNL2 185 aa17.33■□□□□ 0.37
CCM2-216ENST00000488727 CAMK2AQ9UQM7 478 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms