RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 OR6V1Q8N148 313 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 KDM8Q8N371 416 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 RFLNBQ8N5W9 214 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 OR6K6Q8NGW6 343 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 OR2T4Q8NH00 348 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 OR2T27Q8NH04 317 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 DYNC2LI1Q8TCX1 351 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 SMAP2Q8WU79 429 aaPredicted RBP8.47□□□□□ -1.05
SF3B1-211ENST00000487698 SPRYD4Q8WW59 207 aaPredicted RBP8.47□□□□□ -1.05
SF3B1-211ENST00000487698 ASB10Q8WXI3 467 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 C5orf34Q96MH7 638 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 PIGQQ9BRB3 760 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 SYT4Q9H2B2 425 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 ISG20L2Q9H9L3 353 aaKnown RBP8.47□□□□□ -1.05
SF3B1-211ENST00000487698 ZFP64Q9NPA5 681 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 ZMIZ1Q9ULJ6 1067 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 SF3B6Q9Y3B4 125 aaKnown RBP8.47□□□□□ -1.05
SF3B1-211ENST00000487698 NOX1Q9Y5S8 564 aa8.47□□□□□ -1.05
SF3B1-211ENST00000487698 ARGFXA6NJG6 315 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 XKRYO14609 159 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 AHCYL1O43865 530 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 SELENOFO60613 162 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 OPN1LWP04000 364 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 SFTPDP35247 375 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 NAA10P41227 235 aaPredicted RBP8.46□□□□□ -1.06
SF3B1-211ENST00000487698 CRYBB2P43320 205 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 DAP3P51398 398 aaKnown RBP8.46□□□□□ -1.06
SF3B1-211ENST00000487698 HSF1Q00613 529 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 NHLH1Q02575 133 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 POU3F1Q03052 451 aaPredicted RBP8.46□□□□□ -1.06
SF3B1-211ENST00000487698 RUNX1T1Q06455 604 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 MELKQ14680 651 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 SOWAHCQ53LP3 525 aaPredicted RBP8.46□□□□□ -1.06
SF3B1-211ENST00000487698 FAM205BPQ63HN1 556 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 TMPPEQ6ZT21 453 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 SSX6Q7RTT6 188 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 WDFY1Q8IWB7 410 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 SLC35F2Q8IXU6 374 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 PM20D2Q8IYS1 436 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 ZNF248Q8NDW4 579 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 MDS2Q8NDY4 140 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 OR2M7Q8NG81 312 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 FAM173AQ9BQD7 235 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 CHCHD6Q9BRQ6 235 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 CENPOQ9BU64 300 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 OR2B2Q9GZK3 357 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 NUAK2Q9H093 628 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 MARCH7Q9H992 704 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 STUB1Q9UNE7 303 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 PCDHGB7Q9Y5F8 929 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 FKBP7Q9Y680 259 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 CELSR3Q9NYQ7 3312 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 AKAP13Q12802 2813 aa8.46□□□□□ -1.06
SF3B1-211ENST00000487698 IGLV1-36A0A0B4J1U3 117 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 LOC102725191A0A1B0GVB3 256 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 SLC22A23A1A5C7 686 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 A6NIZ1 184 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 AQP7P3A6NL99 342 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 ZNF814B7Z6K7 855 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 NPIPA5E9PKD4 350 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 NKX2-8O15522 239 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 IFNGR1P15260 489 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 UGT2B10P36537 528 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 PEX19P40855 299 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 OR2B6P58173 313 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 RAP1BP61224 184 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 RPS3AP61247 264 aaKnown RBP8.45□□□□□ -1.06
SF3B1-211ENST00000487698 RAP1AP62834 184 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 RAC1P63000 192 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 SLC35A1P78382 337 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 H3F3AP84243 136 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 CLN3Q13286 438 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 CRTC2Q53ET0 693 aaPredicted RBP8.45□□□□□ -1.06
SF3B1-211ENST00000487698 VASNQ6EMK4 673 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 GDPGP1Q6ZNW5 385 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 LINC00696Q6ZRV3 163 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 SLC35D2Q76EJ3 337 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 TIGD4Q8IY51 512 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 ZNF511Q8NB15 262 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 FAM83FQ8NEG4 500 aaPredicted RBP8.45□□□□□ -1.06
SF3B1-211ENST00000487698 UFD1Q92890 307 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 ZHX1-C8orf76Q96EF9 292 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 TRMT61AQ96FX7 289 aaKnown RBP8.45□□□□□ -1.06
SF3B1-211ENST00000487698 KCNK17Q96T54 332 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 MFRPQ9BY79 579 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 RNF32Q9H0A6 362 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 RNF167Q9H6Y7 350 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 ZNF703Q9H7S9 590 aaPredicted RBP8.45□□□□□ -1.06
SF3B1-211ENST00000487698 SRA1Q9HD15 236 aaKnown RBP8.45□□□□□ -1.06
SF3B1-211ENST00000487698 KLHL13Q9P2N7 655 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 BOKQ9UMX3 212 aaPredicted RBP8.45□□□□□ -1.06
SF3B1-211ENST00000487698 NPIPA1Q9UND3 350 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 COPS3Q9UNS2 423 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 LOC100506127A0A0U1RQW1 187 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 FAM171A2A8MVW0 826 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 SULT2B1O00204 365 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 SEC14L5O43304 696 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 TRAF3IP2O43734 574 aaPredicted RBP8.45□□□□□ -1.06
SF3B1-211ENST00000487698 MT-ND5P03915 603 aa8.45□□□□□ -1.06
SF3B1-211ENST00000487698 CTLA4P16410 223 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms