RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	HIST1H2AB	P04908	130 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	ADORA3	P0DMS8	318 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	IGHV4-31	P0DP07	118 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	CSNK1A1	P48729	337 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	PPOX	P50336	477 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	PCBP3	P57721	371 aa	Known RBP	10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	PIGF	Q07326	219 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	CAMK2D	Q13557	499 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	DAG1	Q14118	895 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	SELPLG	Q14242	412 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	DUSP7	Q16829	419 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	PHYHD1	Q5SRE7	291 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	TTC33	Q6PID6	262 aa	Predicted RBP	10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	ZNF813	Q6ZN06	617 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	HIST3H2A	Q7L7L0	130 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	RETREG3	Q86VR2	466 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	SVOPL	Q8N434	492 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	OR6T1	Q8NGN1	323 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	OR5J2	Q8NH18	312 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	TSPEAR	Q8WU66	669 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	HIST1H2AC	Q93077	130 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	SIKE1	Q9BRV8	207 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	LPAR3	Q9UBY5	353 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	CMAHP	Q9Y471	501 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	SPEF1	Q9Y4P9	236 aa		10.79	□□□□□ -0.68
SREBF1-215	ENST00000487401	FREM1	Q5H8C1	2179 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	LOC100289279	A0A1B0GTE1	492 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	SH3PXD2B	A1X283	911 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	ZNF503-AS2	A6NEH8	195 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	VWC2L	B2RUY7	222 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	C11orf98	E9PRG8	122 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	CHP2	O43745	196 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	LMX1B	O60663	402 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	CH25H	O95992	272 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	FAM157C	P0CG43	387 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	APEH	P13798	732 aa	Known RBP	10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	SNTB2	Q13425	540 aa	Known RBP	10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	GSG1	Q2KHT4	349 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	TRMT5	Q32P41	509 aa	Known RBP	10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	ENTPD8	Q5MY95	495 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	INTS11	Q5TA45	600 aa	Known RBP	10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	METTL21C	Q5VZV1	264 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	KRT80	Q6KB66	452 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	LINC00114	Q6XXX2	140 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	MYPOP	Q86VE0	399 aa	Predicted RBP	10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	GPR32P1	Q8NGA4	272 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	OR10A6	Q8NH74	314 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	VANGL1	Q8TAA9	524 aa	Predicted RBP	10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	NEU4	Q8WWR8	484 aa	Predicted RBP	10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	DOK1	Q99704	481 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	SHARPIN	Q9H0F6	387 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	ZNF385D	Q9H6B1	395 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	KAT8	Q9H7Z6	458 aa	Known RBP	10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	NOX3	Q9HBY0	568 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	DYNLRB1	Q9NP97	96 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	MED4	Q9NPJ6	270 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	TMEM160	Q9NX00	188 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	B3GNT2	Q9NY97	397 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	KCNS2	Q9ULS6	477 aa		10.78	□□□□□ -0.68
SREBF1-215	ENST00000487401	CAD	P27708	2225 aa		10.77	□□□□□ -0.68
SREBF1-215	ENST00000487401	FBN1	P35555	2871 aa	Known RBP	10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	TRAPPC13	A5PLN9	417 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	KPNA4	O00629	521 aa	Predicted RBP	10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	RNF13	O43567	381 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	EDF1	O60869	148 aa	Known RBP	10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	ENTPD5	O75356	428 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	RAB36	O95755	333 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	DAO	P14920	347 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	IFNGR1	P15260	489 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	B4GALT1	P15291	398 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	ZNF16	P17020	682 aa	Predicted RBP	10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	LSP1	P33241	339 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	PCGF2	P35227	344 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	PTDSS1	P48651	473 aa	Known RBP	10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	BID	P55957	195 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	CYLC2	Q14093	348 aa	Predicted RBP	10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	NPTX1	Q15818	432 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	GKAP1	Q5VSY0	366 aa	Predicted RBP	10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	NHLRC1	Q6VVB1	395 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	SLC35D2	Q76EJ3	337 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	RBM45	Q8IUH3	476 aa	Known RBP	10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	ADAMTS16	Q8TE57	1224 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	RASSF5	Q8WWW0	418 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	TMEM158	Q8WZ71	300 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	MPP4	Q96JB8	637 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	FOXB1	Q99853	325 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	SH3GL1	Q99961	368 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	DENND2D	Q9H6A0	471 aa	Predicted RBP	10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	NANS	Q9NR45	359 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	FBXL3	Q9UKT7	428 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	SLC7A7	Q9UM01	511 aa		10.77	□□□□□ -0.69
SREBF1-215	ENST00000487401	IGHV4-61	A0A0C4DH41	118 aa		10.76	□□□□□ -0.69
SREBF1-215	ENST00000487401	UBL3	O95164	117 aa		10.76	□□□□□ -0.69
SREBF1-215	ENST00000487401	STAMBP	O95630	424 aa		10.76	□□□□□ -0.69
SREBF1-215	ENST00000487401	ADRA2A	P08913	450 aa		10.76	□□□□□ -0.69
SREBF1-215	ENST00000487401	UMPS	P11172	480 aa		10.76	□□□□□ -0.69
SREBF1-215	ENST00000487401	CD247	P20963	164 aa		10.76	□□□□□ -0.69
SREBF1-215	ENST00000487401	NR4A1	P22736	598 aa		10.76	□□□□□ -0.69
SREBF1-215	ENST00000487401	GIPR	P48546	466 aa		10.76	□□□□□ -0.69
SREBF1-215	ENST00000487401	RAB1A	P62820	205 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms