RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 AP4B1Q9Y6B7 739 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 KIAA1549LQ6ZVL6 1849 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 TICRRQ7Z2Z1 1910 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 MYO10Q9HD67 2058 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 MYLKQ15746 1914 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 MUC22E2RYF6 1773 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-216ENST00000487043 COL4A2P08572 1712 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 NPIPA5A0A0B4J1W7 369 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 A0A0U1RQS6 177 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 C1orf232A0A0U1RR37 186 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 PRR23AA6NEV1 266 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 RNF212BA8MTL3 300 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 ARHGEF33A8MVX0 844 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 A8MX80 341 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 TRIM49D1C9J1S8 452 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 NPIPA5E9PKD4 350 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 PSMD11O00231 422 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 KPNA3O00505 521 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-216ENST00000487043 CCL22O00626 93 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 PFDN6O15212 129 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 TYROBPO43914 113 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 PDE5AO76074 875 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 SRP72O76094 671 aaKnown RBP3.31□□□□□ -1.88
PTCD3-216ENST00000487043 RHOBTB1O94844 696 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 IL1BP01584 269 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 CCDC159P0C7I6 412 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 ZNF30P17039 623 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 OGNP20774 298 aaKnown RBP3.31□□□□□ -1.88
PTCD3-216ENST00000487043 ZNF10P21506 573 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-216ENST00000487043 OTX2P32243 289 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 FOXN2P32314 431 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 CHI3L1P36222 383 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-216ENST00000487043 CD151P48509 253 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 SPINT3P49223 89 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 ACADVLP49748 655 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 RGS4P49798 205 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 CSRP3P50461 194 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 GTF2A1P52655 376 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-216ENST00000487043 STC1P52823 247 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 NDUFV3P56181 108 aaKnown RBP3.31□□□□□ -1.88
PTCD3-216ENST00000487043 XIAPP98170 497 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 IL24Q13007 206 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 PEX6Q13608 980 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 ZNF146Q15072 292 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 TMED2Q15363 201 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 MS4A18Q3C1V0 323 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 TMEM30BQ3MIR4 351 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 TMEM52BQ4KMG9 183 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 LRRC66Q68CR7 880 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 ZNF470Q6ECI4 717 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 LEG1Q6P5S2 330 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 APOOLQ6UXV4 268 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 CERS6Q6ZMG9 384 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 ADAMTSL5Q6ZMM2 481 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 KDM7AQ6ZMT4 941 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 NUFIP2Q7Z417 695 aaKnown RBP3.31□□□□□ -1.88
PTCD3-216ENST00000487043 SNX20Q7Z614 316 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 TSEN54Q7Z6J9 526 aaKnown RBP3.31□□□□□ -1.88
PTCD3-216ENST00000487043 CARM1Q86X55 608 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 ZFAND4Q86XD8 727 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 MMAAQ8IVH4 418 aaKnown RBP3.31□□□□□ -1.88
PTCD3-216ENST00000487043 ZNF614Q8N883 585 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 GPR26Q8NDV2 337 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 OR1B1Q8NGR6 318 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 ACMSDQ8TDX5 336 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 SSC4DQ8WTU2 575 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 FAM3CQ92520 227 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 OSTF1Q92882 214 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 UPRTQ96BW1 309 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 PPP1R16AQ96I34 528 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 SERAC1Q96JX3 654 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 DNAJC1Q96KC8 554 aaKnown RBP3.31□□□□□ -1.88
PTCD3-216ENST00000487043 DUX3Q96PT4 197 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 PARLQ9H300 379 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 RHOJQ9H4E5 214 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 ASB8Q9H765 288 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 SUDS3Q9H7L9 328 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-216ENST00000487043 MOB1AQ9H8S9 216 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 ZDHHC4Q9NPG8 344 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 IL26Q9NPH9 171 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 SCRT2Q9NQ03 307 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 MBD2Q9UBB5 411 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 DCDC2Q9UHG0 476 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 MGAT4AQ9UM21 535 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 SCML1Q9UN30 329 aa3.31□□□□□ -1.88
PTCD3-216ENST00000487043 C5orf42Q9H799 3197 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 IGLV7-46A0A075B6I9 117 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 IGHV4-30-2A0A087WSY4 118 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 C15orf38-AP3S2A0A0A6YYH1 394 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 GLYATL1P3A0A0U1RQE8 302 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 TMEM120BA0PK00 339 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 MEX3AA1L020 520 aaKnown RBP3.3□□□□□ -1.88
PTCD3-216ENST00000487043 OR51F1A6NGY5 319 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 FBLL1A6NHQ2 334 aaKnown RBP3.3□□□□□ -1.88
PTCD3-216ENST00000487043 FAM47DPA6NHR8 397 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 COPEO14579 308 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 POLR3GO15318 223 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-216ENST00000487043 TM9SF1O15321 606 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 OR1F1O43749 312 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 SPAG7O75391 227 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms