RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 MELKQ14680 651 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 PTGES3Q15185 160 aaKnown RBP11.34□□□□□ -0.59
HDAC6-229ENST00000486665 RNPS1Q15287 305 aaKnown RBP11.34□□□□□ -0.59
HDAC6-229ENST00000486665 ARMC4Q5T2S8 1044 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 EEF1A1P5Q5VTE0 462 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 GTF2IRD2BQ6EKJ0 949 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 RPL13AP3Q6NVV1 102 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 SLC35D2Q76EJ3 337 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 FAM122BQ7Z309 247 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 NUFIP2Q7Z417 695 aaKnown RBP11.34□□□□□ -0.59
HDAC6-229ENST00000486665 GTF2IRD2Q86UP8 949 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 MCEMP1Q8IX19 187 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 TEX47Q8TBZ9 253 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 INTS12Q96CB8 462 aaKnown RBP11.34□□□□□ -0.59
HDAC6-229ENST00000486665 Q96M85 177 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 ZNF570Q96NI8 536 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 ERMAPQ96PL5 475 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-229ENST00000486665 EMC6Q9BV81 110 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 GRIP2Q9C0E4 1043 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 TXNIPQ9H3M7 391 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 BCO1Q9HAY6 547 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 SMPD3Q9NY59 655 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-229ENST00000486665 KLHL9Q9P2J3 617 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 ORC6Q9Y5N6 252 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 F8P00451 2351 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 A0A1W2PRG6 482 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 ZAR1LA6NP61 321 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 ZNF724A8MTY0 619 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 PRSS44E7EML9 344 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 SS18L1O75177 396 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-229ENST00000486665 IGHMP01871 453 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 FCGR2AP12318 317 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 EDNRAP25101 427 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 CEACAM8P31997 349 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-229ENST00000486665 TIMP3P35625 211 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 VHLP40337 213 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 KIR2DL2P43627 348 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-229ENST00000486665 AQP4P55087 323 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 BIDP55957 195 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 RPL27P61353 136 aaKnown RBP11.33□□□□□ -0.6
HDAC6-229ENST00000486665 GUSBP1Q15486 140 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 PGGHGQ32M88 737 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 ZNF362Q5T0B9 420 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-229ENST00000486665 SLC35F1Q5T1Q4 408 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 GCNT2Q8N0V5 402 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 NAXEQ8NCW5 288 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 OR52L1Q8NGH7 329 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 ZNF519Q8TB69 540 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 ASB10Q8WXI3 467 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 RASD2Q96D21 266 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 GMPPAQ96IJ6 420 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-229ENST00000486665 DMRTA2Q96SC8 542 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 TM9SF2Q99805 663 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 POLDIP3Q9BY77 421 aaKnown RBP11.33□□□□□ -0.6
HDAC6-229ENST00000486665 RASSF4Q9H2L5 321 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 SLC25A19Q9HC21 320 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 FAM118AQ9NWS6 357 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 MEMO1Q9Y316 297 aa11.33□□□□□ -0.6
HDAC6-229ENST00000486665 PCNX1Q96RV3 2341 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 PKDREJQ9NTG1 2253 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 A0A0G2JNJ9 132 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 TEX13CA0A0J9YWL9 993 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 SLC35F4A4IF30 521 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 E9PLN8 166 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 IMPA2O14732 288 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 ARPC3O15145 178 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 ZNF432O94892 652 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 SLC2A10O95528 541 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 TXNDC12O95881 172 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 BCL10O95999 233 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 CDH2P19022 906 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-229ENST00000486665 AGTR1P30556 359 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 ACVR1BP36896 505 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 SELENOPP49908 381 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 CASP6P55212 293 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 SIRPAP78324 504 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 ADARB1P78563 741 aaKnown RBP11.32□□□□□ -0.6
HDAC6-229ENST00000486665 MYBPC1Q00872 1141 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 CAMK2DQ13557 499 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 TAF11Q15544 211 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 SLX4IPQ5VYV7 408 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 OR2A2Q6IF42 318 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 SLC27A4Q6P1M0 643 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 AAED1Q7RTV5 226 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.32□□□□□ -0.6
HDAC6-229ENST00000486665 LNX2Q8N448 690 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 ARIH2OSQ8N7S6 290 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 OR2T33Q8NG76 320 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 RDH12Q96NR8 316 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 VKORC1Q9BQB6 163 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 NDEL1Q9GZM8 345 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 VCXQ9H320 206 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 VCX3BQ9H321 246 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 GP6Q9HCN6 339 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 GLRX2Q9NS18 164 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 GRHPRQ9UBQ7 328 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 Q9UFV3 132 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 NOSIPQ9Y314 301 aaKnown RBP11.32□□□□□ -0.6
HDAC6-229ENST00000486665 HIVEP1P15822 2718 aa11.32□□□□□ -0.6
HDAC6-229ENST00000486665 LOC100130705A0A1B0GUX0 176 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms