RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 VEZF1Q14119 521 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 SERTAD2Q14140 314 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 SMCO1Q147U7 214 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 PON3Q15166 354 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 TPSAB1Q15661 275 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 ETFDHQ16134 617 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 ADRM1Q16186 407 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 DPY19L1Q2PZI1 675 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 UGT3A2Q3SY77 523 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 PIGGQ5H8A4 983 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 GPR157Q5UAW9 335 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 ZNF549Q6P9A3 640 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 PODNL1Q6PEZ8 512 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 MBOAT1Q6ZNC8 495 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 SLC46A3Q7Z3Q1 461 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 SLC38A6Q8IZM9 456 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 C1orf52Q8N6N3 182 aaKnown RBP6.09□□□□□ -1.43
HDAC3-209ENST00000486618 RNF148Q8N7C7 305 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 EEF1AKMT1Q8WVE0 214 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 C1orf54Q8WWF1 131 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 NEIL2Q969S2 332 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 PHF21AQ96BD5 680 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 PYCR2Q96C36 320 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 KLHL29Q96CT2 875 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 CCDC124Q96CT7 223 aaKnown RBP6.09□□□□□ -1.43
HDAC3-209ENST00000486618 NTNG2Q96CW9 530 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 LINGO1Q96FE5 620 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 JSRP1Q96MG2 331 aaPredicted RBP6.09□□□□□ -1.43
HDAC3-209ENST00000486618 TIMP4Q99727 224 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 NAT9Q9BTE0 207 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 ALG12Q9BV10 488 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 FNDC11Q9BVV2 318 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 RBM24Q9BX46 236 aaKnown RBP6.09□□□□□ -1.43
HDAC3-209ENST00000486618 ALOXE3Q9BYJ1 711 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 NELFAQ9H3P2 528 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 KLHL31Q9H511 634 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 FBXO6Q9NRD1 293 aaPredicted RBP6.09□□□□□ -1.43
HDAC3-209ENST00000486618 UFSP2Q9NUQ7 469 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 SLCO1C1Q9NYB5 712 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 TAS2R13Q9NYV9 303 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 OR6C3Q9NZP0 311 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 JKAMPQ9P055 326 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 MID2Q9UJV3 735 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 TBC1D24Q9ULP9 559 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 PLA2G2DQ9UNK4 145 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 FAF1Q9UNN5 650 aaPredicted RBP6.09□□□□□ -1.43
HDAC3-209ENST00000486618 HEATR5AQ86XA9 2040 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 MXRA5Q9NR99 2828 aa6.09□□□□□ -1.43
HDAC3-209ENST00000486618 MED12LQ86YW9 2145 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 ZANQ9Y493 2812 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 FBN1P35555 2871 aaKnown RBP6.08□□□□□ -1.44
HDAC3-209ENST00000486618 MBD3L5A6NJ08 208 aaPredicted RBP6.08□□□□□ -1.44
HDAC3-209ENST00000486618 C17orf105B2RV13 164 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 TEX22C9J3V5 150 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 ABCD4O14678 606 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 CTIFO43310 598 aaKnown RBP6.08□□□□□ -1.44
HDAC3-209ENST00000486618 ERI3O43414 337 aaKnown RBP6.08□□□□□ -1.44
HDAC3-209ENST00000486618 LANCL1O43813 399 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 TRAPPC6AO75865 159 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 C1QAP02745 245 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 RFPL3SP0C7P2 107 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 OR2T7P0C7T2 308 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 OCMP0CE72 109 aaPredicted RBP6.08□□□□□ -1.44
HDAC3-209ENST00000486618 ZSCAN5DPP0CG00 497 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 GDF1P27539 372 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 HSD11B1P28845 292 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 TMED10P49755 219 aaKnown RBP6.08□□□□□ -1.44
HDAC3-209ENST00000486618 RAB9AP51151 201 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 ACTBP60709 375 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 ARF6P62330 175 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 ACTA2P62736 377 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 ACTG1P63261 375 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 ACTG2P63267 376 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 ACTC1P68032 377 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 ACTA1P68133 377 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 CRYZQ08257 329 aaKnown RBP6.08□□□□□ -1.44
HDAC3-209ENST00000486618 ACSM1Q08AH1 577 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 MADCAM1Q13477 382 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 VMACQ2NL98 169 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 ZNF791Q3KP31 576 aaPredicted RBP6.08□□□□□ -1.44
HDAC3-209ENST00000486618 GTDC1Q4AE62 458 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 KLHL22Q53GT1 634 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 RNLSQ5VYX0 342 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 SCIMPQ6UWF3 145 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 RRM2BQ7LG56 351 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 CLNKQ7Z7G1 428 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.08□□□□□ -1.44
HDAC3-209ENST00000486618 FAM71CQ8NEG0 241 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 MBD3L2Q8NHZ7 208 aaPredicted RBP6.08□□□□□ -1.44
HDAC3-209ENST00000486618 NUBPLQ8TB37 319 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 SLC2A12Q8TD20 617 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 PTPMT1Q8WUK0 201 aaPredicted RBP6.08□□□□□ -1.44
HDAC3-209ENST00000486618 TMEM158Q8WZ71 300 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 FBXL8Q96CD0 374 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 BOD1Q96IK1 185 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 ZFP3Q96NJ6 502 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 OR4K3Q96R72 315 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 CCL19Q99731 98 aa6.08□□□□□ -1.44
HDAC3-209ENST00000486618 C7orf50Q9BRJ6 194 aaKnown RBP6.08□□□□□ -1.44
HDAC3-209ENST00000486618 OR2B2Q9GZK3 357 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms