RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 FAM153CQ494X1 144 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 ZDHHC24Q6UX98 284 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 RNF130Q86XS8 419 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 DDIASQ8IXT1 998 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 SFXN5Q8TD22 340 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 L3HYPDHQ96EM0 354 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 EMC6Q9BV81 110 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 PTDSS2Q9BVG9 487 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 TAPBPLQ9BX59 468 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 OR51I1Q9H343 314 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 RRAGDQ9NQL2 400 aaPredicted RBP12.68□□□□□ -0.38
U2AF1-211ENST00000486519 SLCO1C1Q9NYB5 712 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 GPR160Q9UJ42 338 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 FOXJ3Q9UPW0 622 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 STK38LQ9Y2H1 464 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 SIGLEC9Q9Y336 463 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 WDR45Q9Y484 360 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 POMT1Q9Y6A1 747 aa12.68□□□□□ -0.38
U2AF1-211ENST00000486519 WI2-2373I1.2A0A1W2PRP0 233 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 VAMP5O95183 116 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 SERPINA5P05154 406 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 OR12D1P0DN82 309 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 CDC25BP30305 580 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 PLTPP55058 493 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 FGF12P61328 243 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 HBA1P69905 142 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 C2orf54Q08AI8 447 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 RBBP4Q09028 425 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 EPS8Q12929 822 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 CALCOCO2Q13137 446 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 ESCO2Q56NI9 601 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 SPATA46Q5T0L3 261 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 C1orf140Q5VVS0 124 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 C6orf89Q6UWU4 347 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 C16orf62Q7Z3J2 963 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 LRRC28Q86X40 367 aaPredicted RBP12.67□□□□□ -0.38
U2AF1-211ENST00000486519 SKA3Q8IX90 412 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 C20orf196Q8IYI0 205 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 KLHL36Q8N4N3 616 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 ZNF519Q8TB69 540 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 SLC25A36Q96CQ1 311 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 SIGLEC11Q96RL6 698 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 TUBB1Q9H4B7 451 aa12.67□□□□□ -0.38
U2AF1-211ENST00000486519 CEACAM18A8MTB9 384 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 NPIPB7O75200 414 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 IGHV3-13P01766 116 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 SFTPBP07988 381 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 GKN3PP0CG01 181 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 HLA-DOBP13765 273 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 ZNF43P17038 809 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 ATP5F1P24539 256 aaPredicted RBP12.66□□□□□ -0.38
U2AF1-211ENST00000486519 SELENOVP59797 346 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 RPL15P61313 204 aaKnown RBP12.66□□□□□ -0.38
U2AF1-211ENST00000486519 TMEM155Q4W5P6 130 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 FAM209AQ5JX71 171 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 TNFAIP8L2Q6P589 184 aaPredicted RBP12.66□□□□□ -0.38
U2AF1-211ENST00000486519 ZNF627Q7L945 461 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 C6orf120Q7Z4R8 191 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 SPICQ8N5J4 248 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 CCNYL1Q8N7R7 359 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 SLC30A7Q8NEW0 376 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 DCAKDQ8WVC6 231 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 SSMEM1Q8WWF3 244 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 ERP44Q9BS26 406 aa12.66□□□□□ -0.38
U2AF1-211ENST00000486519 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.66□□□□□ -0.38
U2AF1-211ENST00000486519 DNAH7Q8WXX0 4024 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 SLC22A23A1A5C7 686 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 TNFRSF13BO14836 293 aaPredicted RBP12.65□□□□□ -0.38
U2AF1-211ENST00000486519 AK1P00568 194 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 MT-ND5P03915 603 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 WNT2P09544 360 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 TAC1P20366 129 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 CXCR1P25024 350 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 SLC3A1Q07837 685 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 HERPUD1Q15011 391 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 DEFB121Q5J5C9 76 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 LRRN1Q6UXK5 716 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 CLECL1Q8IZS7 167 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 MUC20Q8N307 709 aaPredicted RBP12.65□□□□□ -0.38
U2AF1-211ENST00000486519 KRTCAP2Q8N6L1 136 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 PIK3C3Q8NEB9 887 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 IPCEF1Q8WWN9 437 aaPredicted RBP12.65□□□□□ -0.38
U2AF1-211ENST00000486519 RAB40AQ8WXH6 277 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 C11orf40Q8WZ69 217 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 ROPN1LQ96C74 230 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 MTERF3Q96E29 417 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 FAM71F1Q96KD3 344 aaPredicted RBP12.65□□□□□ -0.38
U2AF1-211ENST00000486519 SLC35G5Q96KT7 338 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 SSBP3Q9BWW4 388 aaPredicted RBP12.65□□□□□ -0.38
U2AF1-211ENST00000486519 TMEM106BQ9NUM4 274 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 IL20RAQ9UHF4 553 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 PCDHGB5Q9Y5G0 923 aa12.65□□□□□ -0.38
U2AF1-211ENST00000486519 PCLOQ9Y6V0 5065 aa12.64□□□□□ -0.39
U2AF1-211ENST00000486519 A8MVM7 634 aa12.64□□□□□ -0.39
U2AF1-211ENST00000486519 FAAHO00519 579 aa12.64□□□□□ -0.39
U2AF1-211ENST00000486519 LSM1O15116 133 aaKnown RBP12.64□□□□□ -0.39
U2AF1-211ENST00000486519 RAD51CO43502 376 aa12.64□□□□□ -0.39
U2AF1-211ENST00000486519 ZNF205O95201 554 aa12.64□□□□□ -0.39
U2AF1-211ENST00000486519 HPRP00739 348 aa12.64□□□□□ -0.39
U2AF1-211ENST00000486519 TFPTP0C1Z6 253 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms