RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 TUBA1AQ71U36 451 aa13.12□□□□□ -0.31
POLR2J3-204ENST00000486319 ZNF485Q8NCK3 441 aa13.12□□□□□ -0.31
POLR2J3-204ENST00000486319 OR1J4Q8NGS1 313 aa13.12□□□□□ -0.31
POLR2J3-204ENST00000486319 POC1BQ8TC44 478 aa13.12□□□□□ -0.31
POLR2J3-204ENST00000486319 SLC25A43Q8WUT9 341 aaPredicted RBP13.12□□□□□ -0.31
POLR2J3-204ENST00000486319 GATAD2BQ8WXI9 593 aa13.12□□□□□ -0.31
POLR2J3-204ENST00000486319 SMPDL3BQ92485 455 aa13.12□□□□□ -0.31
POLR2J3-204ENST00000486319 PSMF1Q92530 271 aa13.12□□□□□ -0.31
POLR2J3-204ENST00000486319 UFD1Q92890 307 aa13.12□□□□□ -0.31
POLR2J3-204ENST00000486319 PNPLA2Q96AD5 504 aa13.12□□□□□ -0.31
POLR2J3-204ENST00000486319 ZHX1-C8orf76Q96EF9 292 aa13.12□□□□□ -0.31
POLR2J3-204ENST00000486319 OR51E2Q9H255 320 aa13.12□□□□□ -0.31
POLR2J3-204ENST00000486319 LUZP4Q9P127 313 aa13.12□□□□□ -0.31
POLR2J3-204ENST00000486319 TEKT2Q9UIF3 430 aa13.12□□□□□ -0.31
POLR2J3-204ENST00000486319 ZNF346Q9UL40 294 aaKnown RBP13.12□□□□□ -0.31
POLR2J3-204ENST00000486319 MOKQ9UQ07 419 aa13.12□□□□□ -0.31
POLR2J3-204ENST00000486319 PLPP3O14495 311 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 AKAP8O43823 692 aaKnown RBP13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 TRIM3O75382 744 aaPredicted RBP13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 SERPINI2O75830 405 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 GLCEO94923 617 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 IGHMP01871 453 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 P04436 131 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 AHCYP23526 432 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 DIO1P49895 249 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 DSCR4P56555 118 aaPredicted RBP13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 BDH1Q02338 343 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 SELENBP1Q13228 472 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 TPBGQ13641 420 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 GALEQ14376 348 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 DGUOKQ16854 277 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 PLEKHN1Q494U1 663 aaPredicted RBP13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 B3GNTL1Q67FW5 361 aaPredicted RBP13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 IGFL2Q6UWQ7 119 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 ADCK1Q86TW2 530 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 PHC2Q8IXK0 858 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 KBTBD8Q8NFY9 601 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 OR10H4Q8NGA5 316 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 ZNF417Q8TAU3 575 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 NDNFQ8TB73 568 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 DNAJA3Q96EY1 480 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 ARL5BQ96KC2 179 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 SNX18Q96RF0 628 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 ZNF587Q96SQ5 575 aaPredicted RBP13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 CNN2Q99439 309 aaKnown RBP13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 CHCHD6Q9BRQ6 235 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 ALG8Q9BVK2 526 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 TXNIPQ9H3M7 391 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 PROK2Q9HC23 129 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 SACM1LQ9NTJ5 587 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 ASB6Q9NWX5 421 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 ALKBH4Q9NXW9 302 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 STUB1Q9UNE7 303 aa13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 SPENQ96T58 3664 aaKnown RBP13.11□□□□□ -0.31
POLR2J3-204ENST00000486319 TNRC6AQ8NDV7 1962 aaKnown RBP13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 LOC100506127A0A0U1RQW1 187 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 A0A1W2PRG6 482 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 C11orf98E9PRG8 122 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 H3BML4 177 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 XKRYO14609 159 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 FZD7O75084 574 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 CBR3O75828 277 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 MRPL3P09001 348 aaKnown RBP13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 OR2T7P0C7T2 308 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 SERPINB10P48595 397 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 CYB561P49447 251 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 RPL27P61353 136 aaKnown RBP13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 ROR2Q01974 943 aaKnown RBP13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 MFAP5Q13361 173 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 OR7A5Q15622 319 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 MESTQ5EB52 335 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 ZNF468Q5VIY5 522 aaPredicted RBP13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 LIPKQ5VXJ0 399 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 TIGD3Q6B0B8 471 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 ZNF322Q6U7Q0 402 aaPredicted RBP13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 H1FNTQ75WM6 255 aaPredicted RBP13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 ARIH2OSQ8N7S6 290 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 TMEM99Q8N816 258 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 ATP6V1C2Q8NEY4 427 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 OR2T27Q8NH04 317 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 DYNC2LI1Q8TCX1 351 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 SPRYD4Q8WW59 207 aaPredicted RBP13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 DCSTAMPQ9H295 470 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 RPRD1BQ9NQG5 326 aaKnown RBP13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 ABI3Q9P2A4 366 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 NOX1Q9Y5S8 564 aa13.1□□□□□ -0.31
POLR2J3-204ENST00000486319 LIPT2A6NK58 231 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 SHISA8B8ZZ34 492 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 EFNA2O43921 213 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 CLPXO76031 633 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 IMPDH2P12268 514 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 DPP4P27487 766 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 ACVR1BP36896 505 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 PUDPQ08623 228 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 DYNC1I2Q13409 638 aaKnown RBP13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 IGFBP7Q16270 282 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 ACKR1Q16570 336 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 Q6ZS92 163 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 LINC00299Q6ZSB3 139 aa13.09□□□□□ -0.31
POLR2J3-204ENST00000486319 GTPBP8Q8N3Z3 284 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms