RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 TRMT5Q32P41 509 aaKnown RBP11.48□□□□□ -0.57
UBA3-210ENST00000485424 MS4A18Q3C1V0 323 aa11.48□□□□□ -0.57
UBA3-210ENST00000485424 SWT1Q5T5J6 900 aaKnown RBP11.48□□□□□ -0.57
UBA3-210ENST00000485424 GKAP1Q5VSY0 366 aaPredicted RBP11.48□□□□□ -0.57
UBA3-210ENST00000485424 KRT80Q6KB66 452 aa11.48□□□□□ -0.57
UBA3-210ENST00000485424 TTC33Q6PID6 262 aaPredicted RBP11.48□□□□□ -0.57
UBA3-210ENST00000485424 ZNF813Q6ZN06 617 aa11.48□□□□□ -0.57
UBA3-210ENST00000485424 DHDDSQ86SQ9 333 aa11.48□□□□□ -0.57
UBA3-210ENST00000485424 MSRB3Q8IXL7 192 aa11.48□□□□□ -0.57
UBA3-210ENST00000485424 SVOPLQ8N434 492 aa11.48□□□□□ -0.57
UBA3-210ENST00000485424 C11orf65Q8NCR3 313 aa11.48□□□□□ -0.57
UBA3-210ENST00000485424 CKAP2Q8WWK9 683 aa11.48□□□□□ -0.57
UBA3-210ENST00000485424 LRR1Q96L50 414 aa11.48□□□□□ -0.57
UBA3-210ENST00000485424 ATP6V1G3Q96LB4 118 aa11.48□□□□□ -0.57
UBA3-210ENST00000485424 C19orf24Q9BVV8 132 aa11.48□□□□□ -0.57
UBA3-210ENST00000485424 SEC61A2Q9H9S3 476 aa11.48□□□□□ -0.57
UBA3-210ENST00000485424 INTS9Q9NV88 658 aaKnown RBP11.48□□□□□ -0.57
UBA3-210ENST00000485424 MED29Q9NX70 200 aa11.48□□□□□ -0.57
UBA3-210ENST00000485424 NDUFAF1Q9Y375 327 aa11.48□□□□□ -0.57
UBA3-210ENST00000485424 CMAHPQ9Y471 501 aa11.48□□□□□ -0.57
UBA3-210ENST00000485424 IGKV1D-42A0A075B6H8 117 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 IGHV2OR16-5A0A0B4J2B6 119 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 ENTPD5O75356 428 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 MT-ATP6P00846 226 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 TGFAP01135 160 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 BGLAPP02818 100 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 HIST1H2ABP04908 130 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 ADORA3P0DMS8 318 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 HLA-DOBP13765 273 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 PTDSS1P48651 473 aaKnown RBP11.47□□□□□ -0.57
UBA3-210ENST00000485424 CHN2P52757 468 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 CDH12P55289 794 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 PIGFQ07326 219 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 ADRM1Q16186 407 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 ZNF613Q6PF04 617 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 HIST3H2AQ7L7L0 130 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 SLC30A8Q8IWU4 369 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 C20orf196Q8IYI0 205 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 SMYD1Q8NB12 490 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 OR5J2Q8NH18 312 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 HIST1H2ACQ93077 130 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 ZNF837Q96EG3 531 aaPredicted RBP11.47□□□□□ -0.57
UBA3-210ENST00000485424 FOXB1Q99853 325 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 CPPED1Q9BRF8 314 aaPredicted RBP11.47□□□□□ -0.57
UBA3-210ENST00000485424 TMEM43Q9BTV4 400 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 BPESC1Q9GZL8 116 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 MRPL39Q9NYK5 338 aaKnown RBP11.47□□□□□ -0.57
UBA3-210ENST00000485424 FBXL3Q9UKT7 428 aa11.47□□□□□ -0.57
UBA3-210ENST00000485424 CPSF4LA6NMK7 179 aaKnown RBP11.46□□□□□ -0.57
UBA3-210ENST00000485424 M0R3H8 397 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 CHP2O43745 196 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 FZD7O75084 574 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 MFN2O95140 757 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 UBL3O95164 117 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 STAMBPO95630 424 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 HLA-HP01893 362 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 OPN1SWP03999 348 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 UMPSP11172 480 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 B4GALT1P15291 398 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 ZNF23P17027 643 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 CSNK1A1P48729 337 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 BIDP55957 195 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 RPS23P62266 143 aaKnown RBP11.46□□□□□ -0.57
UBA3-210ENST00000485424 HGFACQ04756 655 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 RBBP4Q09028 425 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 NFYCQ13952 458 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 RUNDC3AQ59EK9 446 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 PHYHD1Q5SRE7 291 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 FAM120AOSQ5T036 256 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 PXKQ7Z7A4 578 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 MYPOPQ86VE0 399 aaPredicted RBP11.46□□□□□ -0.57
UBA3-210ENST00000485424 COMTD1Q86VU5 262 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 TMEM123Q8N131 208 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 C10orf111Q8N326 155 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 VANGL1Q8TAA9 524 aaPredicted RBP11.46□□□□□ -0.57
UBA3-210ENST00000485424 UBASH3BQ8TF42 649 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 MSI2Q96DH6 328 aaKnown RBP11.46□□□□□ -0.57
UBA3-210ENST00000485424 THOC1Q96FV9 657 aaKnown RBP11.46□□□□□ -0.57
UBA3-210ENST00000485424 SLC41A3Q96GZ6 507 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 MOGAT1Q96PD6 335 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 NOX3Q9HBY0 568 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 GMEB1Q9Y692 573 aa11.46□□□□□ -0.57
UBA3-210ENST00000485424 TRBV5-3A0A0A0MS03 114 aa11.45□□□□□ -0.58
UBA3-210ENST00000485424 IGHV4-61A0A0C4DH41 118 aa11.45□□□□□ -0.58
UBA3-210ENST00000485424 M0QX08 132 aa11.45□□□□□ -0.58
UBA3-210ENST00000485424 PLPP3O14495 311 aa11.45□□□□□ -0.58
UBA3-210ENST00000485424 RNF13O43567 381 aa11.45□□□□□ -0.58
UBA3-210ENST00000485424 FMO6PO60774 539 aa11.45□□□□□ -0.58
UBA3-210ENST00000485424 HPRP00739 348 aa11.45□□□□□ -0.58
UBA3-210ENST00000485424 ADRA2AP08913 450 aa11.45□□□□□ -0.58
UBA3-210ENST00000485424 IFNGR1P15260 489 aa11.45□□□□□ -0.58
UBA3-210ENST00000485424 MTPNP58546 118 aa11.45□□□□□ -0.58
UBA3-210ENST00000485424 ENTPD8Q5MY95 495 aa11.45□□□□□ -0.58
UBA3-210ENST00000485424 INTS11Q5TA45 600 aaKnown RBP11.45□□□□□ -0.58
UBA3-210ENST00000485424 UGT2A3Q6UWM9 527 aa11.45□□□□□ -0.58
UBA3-210ENST00000485424 RASSF5Q8WWW0 418 aa11.45□□□□□ -0.58
UBA3-210ENST00000485424 TXNDC15Q96J42 360 aa11.45□□□□□ -0.58
UBA3-210ENST00000485424 DOK1Q99704 481 aa11.45□□□□□ -0.58
UBA3-210ENST00000485424 TPK1Q9H3S4 243 aa11.45□□□□□ -0.58
UBA3-210ENST00000485424 IKZF5Q9H5V7 419 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms