RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 IFNGR1P15260 489 aa16.58■□□□□ 0.24
COL27A1-205ENST00000485397 B4GALT1P15291 398 aa16.58■□□□□ 0.24
COL27A1-205ENST00000485397 PPIBP23284 216 aaKnown RBP16.58■□□□□ 0.24
COL27A1-205ENST00000485397 CDH12P55289 794 aa16.58■□□□□ 0.24
COL27A1-205ENST00000485397 RIN1Q13671 783 aa16.58■□□□□ 0.24
COL27A1-205ENST00000485397 SQLEQ14534 574 aa16.58■□□□□ 0.24
COL27A1-205ENST00000485397 C10orf53Q8N6V4 93 aa16.58■□□□□ 0.24
COL27A1-205ENST00000485397 SCAIQ8N9R8 606 aa16.58■□□□□ 0.24
COL27A1-205ENST00000485397 OR6N1Q8NGY5 312 aa16.58■□□□□ 0.24
COL27A1-205ENST00000485397 MRPL24Q96A35 216 aaKnown RBP16.58■□□□□ 0.24
COL27A1-205ENST00000485397 C7orf26Q96N11 449 aa16.58■□□□□ 0.24
COL27A1-205ENST00000485397 TMEM38AQ9H6F2 299 aa16.58■□□□□ 0.24
COL27A1-205ENST00000485397 SLCO1B3Q9NPD5 702 aa16.58■□□□□ 0.24
COL27A1-205ENST00000485397 B3GAT2Q9NPZ5 323 aa16.58■□□□□ 0.24
COL27A1-205ENST00000485397 MRPL39Q9NYK5 338 aaKnown RBP16.58■□□□□ 0.24
COL27A1-205ENST00000485397 ZNF224Q9NZL3 707 aa16.58■□□□□ 0.24
COL27A1-205ENST00000485397 SLC13A4Q9UKG4 626 aa16.58■□□□□ 0.24
COL27A1-205ENST00000485397 PRORSD1PA6NEY8 169 aa16.57■□□□□ 0.24
COL27A1-205ENST00000485397 ZNF726A6NNF4 738 aa16.57■□□□□ 0.24
COL27A1-205ENST00000485397 PLPP3O14495 311 aa16.57■□□□□ 0.24
COL27A1-205ENST00000485397 ZNF35P13682 527 aa16.57■□□□□ 0.24
COL27A1-205ENST00000485397 ZNF14P17017 642 aaPredicted RBP16.57■□□□□ 0.24
COL27A1-205ENST00000485397 GPX2P18283 190 aa16.57■□□□□ 0.24
COL27A1-205ENST00000485397 AHCYP23526 432 aa16.57■□□□□ 0.24
COL27A1-205ENST00000485397 SLC6A2P23975 617 aa16.57■□□□□ 0.24
COL27A1-205ENST00000485397 PTDSS1P48651 473 aaKnown RBP16.57■□□□□ 0.24
COL27A1-205ENST00000485397 PUDPQ08623 228 aa16.57■□□□□ 0.24
COL27A1-205ENST00000485397 LINC01356Q8N9X3 169 aa16.57■□□□□ 0.24
COL27A1-205ENST00000485397 HPS1Q92902 700 aa16.57■□□□□ 0.24
COL27A1-205ENST00000485397 ZNF607Q96SK3 696 aa16.57■□□□□ 0.24
COL27A1-205ENST00000485397 SYT3Q9BQG1 590 aa16.57■□□□□ 0.24
COL27A1-205ENST00000485397 ULBP2Q9BZM5 246 aa16.57■□□□□ 0.24
COL27A1-205ENST00000485397 REV1Q9UBZ9 1251 aa16.57■□□□□ 0.24
COL27A1-205ENST00000485397 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.57■□□□□ 0.24
COL27A1-205ENST00000485397 NOX1Q9Y5S8 564 aa16.57■□□□□ 0.24
COL27A1-205ENST00000485397 GMEB1Q9Y692 573 aa16.57■□□□□ 0.24
COL27A1-205ENST00000485397 SERPINB7O75635 380 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 MFN2O95140 757 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 TGDSO95455 350 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 TCN1P20061 433 aaPredicted RBP16.56■□□□□ 0.24
COL27A1-205ENST00000485397 GIPRP48546 466 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 SEC24CP53992 1094 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 CDH15P55291 814 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 RAB1AP62820 205 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 CCNIQ14094 377 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 TRMT5Q32P41 509 aaKnown RBP16.56■□□□□ 0.24
COL27A1-205ENST00000485397 AGKQ53H12 422 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 ZNF627Q7L945 461 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 LRP11Q86VZ4 500 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 ARMC8Q8IUR7 673 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 SMYD1Q8NB12 490 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 HIPK4Q8NE63 616 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 C1orf159Q96HA4 380 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 FOXB1Q99853 325 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 TMEM43Q9BTV4 400 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 CCDC28BQ9BUN5 200 aa16.56■□□□□ 0.24
COL27A1-205ENST00000485397 TMEFF2Q9UIK5 374 aaPredicted RBP16.56■□□□□ 0.24
COL27A1-205ENST00000485397 EVPLLA8MZ36 301 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 C11orf98E9PRG8 122 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 M0R3H8 397 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 SYNGR3O43761 229 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 PATE4P0C8F1 98 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 GLRXP35754 106 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 ALDH3B1P43353 468 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 EVX1P49640 407 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 ELFN2Q5R3F8 820 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 LIPNQ5VXI9 398 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 DLEU7Q6UYE1 221 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 PXKQ7Z7A4 578 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 RANBP3LQ86VV4 465 aaPredicted RBP16.55■□□□□ 0.24
COL27A1-205ENST00000485397 BHLHE22Q8NFJ8 381 aaPredicted RBP16.55■□□□□ 0.24
COL27A1-205ENST00000485397 OR5J2Q8NH18 312 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 FGFBP3Q8TAT2 258 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 MCHR1Q99705 422 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 CPPED1Q9BRF8 314 aaPredicted RBP16.55■□□□□ 0.24
COL27A1-205ENST00000485397 MYEF2Q9P2K5 600 aaKnown RBP16.55■□□□□ 0.24
COL27A1-205ENST00000485397 FZR1Q9UM11 496 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 SPEF1Q9Y4P9 236 aa16.55■□□□□ 0.24
COL27A1-205ENST00000485397 M0R233 179 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 RAB36O95755 333 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 HPXP02790 462 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 OPN1SWP03999 348 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 ADORA3P0DMS8 318 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 COL8A2P25067 703 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 SRP14P37108 136 aaKnown RBP16.54■□□□□ 0.24
COL27A1-205ENST00000485397 CSNK1A1P48729 337 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 BIDP55957 195 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 RAB39AQ14964 217 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 MAD2L1BPQ15013 274 aaPredicted RBP16.54■□□□□ 0.24
COL27A1-205ENST00000485397 RUNDC3AQ59EK9 446 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 BEND6Q5SZJ8 279 aaPredicted RBP16.54■□□□□ 0.24
COL27A1-205ENST00000485397 GKAP1Q5VSY0 366 aaPredicted RBP16.54■□□□□ 0.24
COL27A1-205ENST00000485397 LINC00114Q6XXX2 140 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 WDR88Q6ZMY6 472 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 CARM1Q86X55 608 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 PTOV1Q86YD1 416 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 SKA3Q8IX90 412 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 LRRC8CQ8TDW0 803 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 ARHGDIGQ99819 225 aa16.54■□□□□ 0.24
COL27A1-205ENST00000485397 CORO2BQ9UQ03 480 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms