RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 BCHEP06276 602 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 ETFAP13804 333 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 ZNF14P17017 642 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-227ENST00000485102 RPS5P46782 204 aaKnown RBP11.2□□□□□ -0.62
HDAC6-227ENST00000485102 DSTNP60981 165 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 IL1RL1Q01638 556 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 MFSD13AQ14CX5 517 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 MSMPQ1L6U9 139 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 BLOC1S3Q6QNY0 202 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 NHLRC1Q6VVB1 395 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 H1FNTQ75WM6 255 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-227ENST00000485102 CCDC197Q8NCU1 140 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 OR6S1Q8NH40 331 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 RDH5Q92781 318 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 TMEM186Q96B77 213 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 SLC25A36Q96CQ1 311 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 ZMYND19Q96E35 227 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-227ENST00000485102 SPDL1Q96EA4 605 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 KTI12Q96EK9 354 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-227ENST00000485102 SLC41A3Q96GZ6 507 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 TMEM19Q96HH6 336 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 LRRC37BQ96QE4 947 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 SH3GL1Q99961 368 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 MRPL37Q9BZE1 423 aaKnown RBP11.2□□□□□ -0.62
HDAC6-227ENST00000485102 CCDC167Q9P0B6 97 aa11.2□□□□□ -0.62
HDAC6-227ENST00000485102 LEF1Q9UJU2 399 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-227ENST00000485102 TMEM89A2RUT3 159 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 TMEM247A6NEH6 219 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 LYNX1G3V0Z9 82 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 WIPF1O43516 503 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 MSMBP08118 114 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 LYNX1P0DP58 116 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 BMP2P12643 396 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 GTF2E2P29084 291 aaKnown RBP11.19□□□□□ -0.62
HDAC6-227ENST00000485102 PRDX6P30041 224 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 CRATP43155 626 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 GPR6P46095 362 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-227ENST00000485102 GYS2P54840 703 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 NME5P56597 212 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 NPRL3Q12980 569 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 C1DQ13901 141 aaKnown RBP11.19□□□□□ -0.62
HDAC6-227ENST00000485102 FXNQ16595 210 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 GSG1Q2KHT4 349 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 MMEL1Q495T6 779 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 AGKQ53H12 422 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 ZNF311Q5JNZ3 666 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 KRT80Q6KB66 452 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 RINLQ6ZS11 566 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 C20orf196Q8IYI0 205 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 TEX29Q8N6K0 151 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 CLDND2Q8NHS1 167 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 SGMS2Q8NHU3 365 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 RP9Q8TA86 221 aaKnown RBP11.19□□□□□ -0.62
HDAC6-227ENST00000485102 BCAS4Q8TDM0 211 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 FAM216AQ8WUB2 273 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 DNAJA4Q8WW22 397 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-227ENST00000485102 SLC38A4Q969I6 547 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 TAAR8Q969N4 342 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 THOC1Q96FV9 657 aaKnown RBP11.19□□□□□ -0.62
HDAC6-227ENST00000485102 OCEL1Q9H607 264 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 ZNF385DQ9H6B1 395 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 METTL17Q9H7H0 456 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-227ENST00000485102 HIF1ANQ9NWT6 349 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 GID8Q9NWU2 228 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 NDE1Q9NXR1 346 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 SEC14L4Q9UDX3 406 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 FBXL3Q9UKT7 428 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 GRIP1Q9Y3R0 1128 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 CORINQ9Y5Q5 1042 aa11.19□□□□□ -0.62
HDAC6-227ENST00000485102 MS4A18H0YCH9 400 aa11.18□□□□□ -0.62
HDAC6-227ENST00000485102 M0R082 166 aa11.18□□□□□ -0.62
HDAC6-227ENST00000485102 HPXP02790 462 aa11.18□□□□□ -0.62
HDAC6-227ENST00000485102 ETS2P15036 469 aa11.18□□□□□ -0.62
HDAC6-227ENST00000485102 COL8A2P25067 703 aa11.18□□□□□ -0.62
HDAC6-227ENST00000485102 GRPRP30550 384 aa11.18□□□□□ -0.62
HDAC6-227ENST00000485102 LMO4P61968 165 aa11.18□□□□□ -0.62
HDAC6-227ENST00000485102 RPS23P62266 143 aaKnown RBP11.18□□□□□ -0.62
HDAC6-227ENST00000485102 CYLC2Q14093 348 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-227ENST00000485102 CCNIQ14094 377 aa11.18□□□□□ -0.62
HDAC6-227ENST00000485102 TRMT5Q32P41 509 aaKnown RBP11.18□□□□□ -0.62
HDAC6-227ENST00000485102 MS4A18Q3C1V0 323 aa11.18□□□□□ -0.62
HDAC6-227ENST00000485102 FAM91A1Q658Y4 838 aa11.18□□□□□ -0.62
HDAC6-227ENST00000485102 CGB2Q6NT52 195 aa11.18□□□□□ -0.62
HDAC6-227ENST00000485102 SCAIQ8N9R8 606 aa11.18□□□□□ -0.62
HDAC6-227ENST00000485102 ZNF417Q8TAU3 575 aa11.18□□□□□ -0.62
HDAC6-227ENST00000485102 ZNF418Q8TF45 676 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-227ENST00000485102 ZNF587Q96SQ5 575 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-227ENST00000485102 TPK1Q9H3S4 243 aa11.18□□□□□ -0.62
HDAC6-227ENST00000485102 CACYBPQ9HB71 228 aaKnown RBP11.18□□□□□ -0.62
HDAC6-227ENST00000485102 SAR1AQ9NR31 198 aa11.18□□□□□ -0.62
HDAC6-227ENST00000485102 IGKV1D-42A0A075B6H8 117 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 TRAV36DV7A0A075B6V5 113 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 TRAV20A0A0B4J274 112 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 EVPLLA8MZ36 301 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 FAM157AC9JC47 383 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 HLA-HP01893 362 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 GAAP10253 952 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 SAGP10523 405 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-227ENST00000485102 ANPEPP15144 967 aa11.17□□□□□ -0.62
HDAC6-227ENST00000485102 EGR1P18146 543 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms