RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 HIF1ANQ9NWT6 349 aa11.95□□□□□ -0.5
VARS-226ENST00000483275 SLC25A37Q9NYZ2 338 aa11.95□□□□□ -0.5
VARS-226ENST00000483275 ZIM2Q9NZV7 527 aa11.95□□□□□ -0.5
VARS-226ENST00000483275 IFT52Q9Y366 437 aa11.95□□□□□ -0.5
VARS-226ENST00000483275 ARHGAP32A7KAX9 2087 aa11.95□□□□□ -0.5
VARS-226ENST00000483275 A0A087WUJ7 227 aa11.94□□□□□ -0.5
VARS-226ENST00000483275 VSTM5A8MXK1 200 aa11.94□□□□□ -0.5
VARS-226ENST00000483275 CLIC1O00299 241 aa11.94□□□□□ -0.5
VARS-226ENST00000483275 AKAP8O43823 692 aaKnown RBP11.94□□□□□ -0.5
VARS-226ENST00000483275 ZNF35P13682 527 aa11.94□□□□□ -0.5
VARS-226ENST00000483275 H2AFXP16104 143 aaPredicted RBP11.94□□□□□ -0.5
VARS-226ENST00000483275 GPR6P46095 362 aaPredicted RBP11.94□□□□□ -0.5
VARS-226ENST00000483275 RAB39AQ14964 217 aa11.94□□□□□ -0.5
VARS-226ENST00000483275 GKAP1Q5VSY0 366 aaPredicted RBP11.94□□□□□ -0.5
VARS-226ENST00000483275 ZNF771Q7L3S4 317 aaPredicted RBP11.94□□□□□ -0.5
VARS-226ENST00000483275 MIER2Q8N344 545 aa11.94□□□□□ -0.5
VARS-226ENST00000483275 ANKK1Q8NFD2 765 aa11.94□□□□□ -0.5
VARS-226ENST00000483275 GTF3AQ92664 365 aaKnown RBP11.94□□□□□ -0.5
VARS-226ENST00000483275 MAELQ96JY0 434 aaKnown RBP11.94□□□□□ -0.5
VARS-226ENST00000483275 MOV10Q9HCE1 1003 aaKnown RBP11.94□□□□□ -0.5
VARS-226ENST00000483275 BCL2L10Q9HD36 194 aa11.94□□□□□ -0.5
VARS-226ENST00000483275 ZNF275Q9NSD4 429 aaPredicted RBP11.94□□□□□ -0.5
VARS-226ENST00000483275 THAP1Q9NVV9 213 aa11.94□□□□□ -0.5
VARS-226ENST00000483275 SLAMF8Q9P0V8 285 aa11.94□□□□□ -0.5
VARS-226ENST00000483275 DUSP13Q9UII6 198 aa11.94□□□□□ -0.5
VARS-226ENST00000483275 METRNQ9UJH8 293 aa11.94□□□□□ -0.5
VARS-226ENST00000483275 NOX1Q9Y5S8 564 aa11.94□□□□□ -0.5
VARS-226ENST00000483275 A0A1W2PPW3 197 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 B4DSR2 109 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 C11orf98E9PRG8 122 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 UBDO15205 165 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 PPIHO43447 177 aaKnown RBP11.93□□□□□ -0.5
VARS-226ENST00000483275 WIPF1O43516 503 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 FAM157BP0CG42 384 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 CCL2P13500 99 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 PAX7P23759 505 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 MAGEB1P43366 347 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 RGS8P57771 180 aaPredicted RBP11.93□□□□□ -0.5
VARS-226ENST00000483275 ERVS71-1P61550 626 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 NCALDP61601 193 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 ACTG1P63261 375 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 HNRNPA0Q13151 305 aaKnown RBP11.93□□□□□ -0.5
VARS-226ENST00000483275 PMS2P3Q13401 168 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 TRMT5Q32P41 509 aaKnown RBP11.93□□□□□ -0.5
VARS-226ENST00000483275 GCNT6Q5T4J0 391 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 AVPI1Q5T686 147 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 SHQ1Q6PI26 577 aaKnown RBP11.93□□□□□ -0.5
VARS-226ENST00000483275 MSANTD1Q6ZTZ1 278 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 ZNF584Q8IVC4 421 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 PAQR4Q8N4S7 273 aaPredicted RBP11.93□□□□□ -0.5
VARS-226ENST00000483275 OR6N1Q8NGY5 312 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 DYDC1Q8WWB3 177 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 TMEM186Q96B77 213 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 LRRC37BQ96QE4 947 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 TSPAN32Q96QS1 320 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 ASPNQ9BXN1 380 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 IKZF5Q9H5V7 419 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 POFUT2Q9Y2G5 429 aa11.93□□□□□ -0.5
VARS-226ENST00000483275 LOC105371242A0A075B767 164 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 HMGB1P1B2RPK0 211 aaPredicted RBP11.92□□□□□ -0.5
VARS-226ENST00000483275 SLCO1B7G3V0H7 640 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 M0R3H8 397 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 OR2T1O43869 369 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 TPST2O60704 377 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 CDC14BO60729 498 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 RAB36O95755 333 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 CLPTM1O96005 669 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 MSMBP08118 114 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 GAAP10253 952 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 ARAFP10398 606 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 BMP2P12643 396 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 AHCYP23526 432 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 PRKAR1BP31321 381 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 BIDP55957 195 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 RAB1AP62820 205 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 GALK2Q01415 458 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 GLO1Q04760 184 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 PUDPQ08623 228 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 MELKQ14680 651 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 FXNQ16595 210 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 NHLRC1Q6VVB1 395 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 WDR88Q6ZMY6 472 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 LSMEM1Q8N8F7 131 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 ADPRHL1Q8NDY3 354 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 SLC41A3Q96GZ6 507 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 FOXB1Q99853 325 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 SH3GL3Q99963 347 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 C12orf10Q9HB07 376 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 B3GAT2Q9NPZ5 323 aa11.92□□□□□ -0.5
VARS-226ENST00000483275 THUMPD1Q9NXG2 353 aaKnown RBP11.92□□□□□ -0.5
VARS-226ENST00000483275 FBXO9Q9UK97 447 aaPredicted RBP11.92□□□□□ -0.5
VARS-226ENST00000483275 A0A0B4J2E0 115 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 A0A1B0GX12 115 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 RP2O75695 350 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 AVPP01185 164 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 ETS2P15036 469 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 GLRXP35754 106 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 CSNK1A1P48729 337 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 CDH12P55289 794 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 CDK6Q00534 326 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms