RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714	TXNDC15	Q96J42	360 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	RDH12	Q96NR8	316 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	CIB1	Q99828	191 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	ELOVL5	Q9NYP7	299 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	ZNF346	Q9UL40	294 aa	Known RBP	13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	ORC6	Q9Y5N6	252 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	SAC3D1	A6NKF1	404 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714		A8MXE2	369 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	PDLIM1	O00151	329 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	SLC43A1	O75387	559 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	TP53	P04637	393 aa	Predicted RBP	13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	ZNF26	P17031	533 aa	Predicted RBP	13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	NTF4	P34130	210 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	STK11	Q15831	433 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	FBXL19-AS1	Q494R0	122 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	FBXW9	Q5XUX1	488 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	FAM122B	Q7Z309	247 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	KIF18B	Q86Y91	864 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	CCDC71	Q8IV32	467 aa	Predicted RBP	13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	LNX2	Q8N448	690 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	CBR4	Q8N4T8	237 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	FAM26E	Q8N5C1	309 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	OR2T33	Q8NG76	320 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	TEX47	Q8TBZ9	253 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	MAGEE2	Q8TD90	523 aa	Predicted RBP	13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	CA5BP1	Q8WTZ4	195 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	ZNF566	Q969W8	418 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	ZNF775	Q96BV0	537 aa	Predicted RBP	13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	SAMD8	Q96LT4	415 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	SNX18	Q96RF0	628 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	USB1	Q9BQ65	265 aa	Known RBP	13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	KATNB1	Q9BVA0	655 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	IFT27	Q9BW83	186 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	POLDIP3	Q9BY77	421 aa	Known RBP	13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	ENKD1	Q9H0I2	346 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	SMURF2	Q9HAU4	748 aa		13.59	□□□□□ -0.23
CCM2-215	ENST00000482714	CLEC18A	A5D8T8	446 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	MCIDAS	D6RGH6	385 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714		H3BN98	237 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	IGHG1	P01857	330 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	HMGN1	P05114	100 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	ACADS	P16219	412 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	BMP5	P22003	454 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	IGFBP5	P24593	272 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	SDHA	P31040	664 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	CRISP1	P54107	249 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	BID	P55957	195 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	CDK5	Q00535	292 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	P2RY6	Q15077	328 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	TRIP10	Q15642	601 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	C1QTNF12	Q5T7M4	302 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	NIPAL3	Q6P499	406 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	VWA1	Q6PCB0	445 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	CLEC18B	Q6UXF7	455 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	TFAP2E	Q6VUC0	442 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	THSD4	Q6ZMP0	1018 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	LIX1L	Q8IVB5	337 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	CLEC18C	Q8NCF0	446 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	ASB10	Q8WXI3	467 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	RBP7	Q96R05	134 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	OR2M2	Q96R28	347 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	ALG12	Q9BV10	488 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	TSSK6	Q9BXA6	273 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	HDHD5	Q9BXW7	423 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	MRPL13	Q9BYD1	178 aa	Known RBP	13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	RASSF4	Q9H2L5	321 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	SLCO5A1	Q9H2Y9	848 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	EGLN3	Q9H6Z9	239 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	KCNJ16	Q9NPI9	418 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	MED29	Q9NX70	200 aa		13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	NCOA6	Q14686	2063 aa	Predicted RBP	13.58	□□□□□ -0.24
CCM2-215	ENST00000482714	ASH1L	Q9NR48	2969 aa	Known RBP	13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	RPL36A-HNRNPH2	H7BZ11	118 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	BHLHE40	O14503	412 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	XKRY	O14609	159 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	EI24	O14681	340 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	CLDN14	O95500	239 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	NOS3	P29474	1203 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	ACVR1B	P36896	505 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	SELENOP	P49908	381 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	ERVK-25	P63136	954 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	SIRPA	P78324	504 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	HIST3H3	Q16695	136 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	SLC36A3	Q495N2	470 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	THEM4	Q5T1C6	240 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	OGFRL1	Q5TC84	451 aa	Predicted RBP	13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	SLC27A4	Q6P1M0	643 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	CASP12	Q6UXS9	341 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714		Q6ZT83	130 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	ADCK1	Q86TW2	530 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	LSR	Q86X29	649 aa	Predicted RBP	13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	C20orf196	Q8IYI0	205 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	TMEM123	Q8N131	208 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	ZNF610	Q8N9Z0	462 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	ERMAP	Q96PL5	475 aa	Predicted RBP	13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	SLC29A1	Q99808	456 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms