RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 GDPD1Q8N9F7 314 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 OR52R1Q8NGF1 315 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 OR8D4Q8NGM9 314 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 TMEM255BQ8WV15 326 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 ZCCHC14Q8WYQ9 949 aaKnown RBP7.01□□□□□ -1.29
SNX13-208ENST00000482558 VSTM2LQ96N03 204 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 PRSS27Q9BQR3 290 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 ZNF426Q9BUY5 554 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 CACNG6Q9BXT2 260 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 ALOXE3Q9BYJ1 711 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 PLA2G12AQ9BZM1 189 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 OR52D1Q9H346 318 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 LMAN1LQ9HAT1 526 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 C12orf10Q9HB07 376 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 MKKSQ9NPJ1 570 aaPredicted RBP7.01□□□□□ -1.29
SNX13-208ENST00000482558 TRIM36Q9NQ86 728 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 EXOSC3Q9NQT5 275 aaKnown RBP7.01□□□□□ -1.29
SNX13-208ENST00000482558 TXNL4BQ9NX01 149 aaKnown RBP7.01□□□□□ -1.29
SNX13-208ENST00000482558 NPAP1Q9NZP6 1156 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 NCDNQ9UBB6 729 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 CLEC2DQ9UHP7 191 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 LIPGQ9Y5X9 500 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 CSNK1G3Q9Y6M4 447 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 GOLGA4Q13439 2230 aaKnown RBP7.01□□□□□ -1.29
SNX13-208ENST00000482558 CACNA1IQ9P0X4 2223 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 ATG2BQ96BY7 2078 aa7□□□□□ -1.29
SNX13-208ENST00000482558 A0A0G2JNJ9 132 aa7□□□□□ -1.29
SNX13-208ENST00000482558 GXYLT2A0PJZ3 443 aa7□□□□□ -1.29
SNX13-208ENST00000482558 ZNF860A6NHJ4 632 aa7□□□□□ -1.29
SNX13-208ENST00000482558 SHISA7A6NL88 538 aa7□□□□□ -1.29
SNX13-208ENST00000482558 ANXA2P2A6NMY6 339 aa7□□□□□ -1.29
SNX13-208ENST00000482558 TMEM150CB9EJG8 249 aa7□□□□□ -1.29
SNX13-208ENST00000482558 NPIPB9F8W1W9 429 aa7□□□□□ -1.29
SNX13-208ENST00000482558 OVOL3O00110 214 aa7□□□□□ -1.29
SNX13-208ENST00000482558 BHLHE40O14503 412 aa7□□□□□ -1.29
SNX13-208ENST00000482558 MAGEB3O15480 346 aa7□□□□□ -1.29
SNX13-208ENST00000482558 AQP9O43315 295 aa7□□□□□ -1.29
SNX13-208ENST00000482558 LYPD3O95274 346 aa7□□□□□ -1.29
SNX13-208ENST00000482558 SERPINA3P01011 423 aa7□□□□□ -1.29
SNX13-208ENST00000482558 THY1P04216 161 aa7□□□□□ -1.29
SNX13-208ENST00000482558 LIMS3P0CW19 117 aa7□□□□□ -1.29
SNX13-208ENST00000482558 LIMS4P0CW20 117 aa7□□□□□ -1.29
SNX13-208ENST00000482558 SAGP10523 405 aaPredicted RBP7□□□□□ -1.29
SNX13-208ENST00000482558 PEPDP12955 493 aa7□□□□□ -1.29
SNX13-208ENST00000482558 AGAP20933 346 aa7□□□□□ -1.29
SNX13-208ENST00000482558 S1PR1P21453 382 aa7□□□□□ -1.29
SNX13-208ENST00000482558 RPS19P39019 145 aaKnown RBP7□□□□□ -1.29
SNX13-208ENST00000482558 SOX3P41225 446 aa7□□□□□ -1.29
SNX13-208ENST00000482558 GPR4P46093 362 aa7□□□□□ -1.29
SNX13-208ENST00000482558 EMDP50402 254 aa7□□□□□ -1.29
SNX13-208ENST00000482558 PNLIPRP2P54317 469 aa7□□□□□ -1.29
SNX13-208ENST00000482558 PRPS1P60891 318 aa7□□□□□ -1.29
SNX13-208ENST00000482558 PPP3R1P63098 170 aa7□□□□□ -1.29
SNX13-208ENST00000482558 PSG6Q00889 435 aa7□□□□□ -1.29
SNX13-208ENST00000482558 MAPK14Q16539 360 aa7□□□□□ -1.29
SNX13-208ENST00000482558 C14orf28Q4W4Y0 310 aa7□□□□□ -1.29
SNX13-208ENST00000482558 CLEC12AQ5QGZ9 265 aa7□□□□□ -1.29
SNX13-208ENST00000482558 LIPKQ5VXJ0 399 aa7□□□□□ -1.29
SNX13-208ENST00000482558 TMEM200BQ69YZ2 307 aa7□□□□□ -1.29
SNX13-208ENST00000482558 TMEM81Q6P7N7 255 aa7□□□□□ -1.29
SNX13-208ENST00000482558 XKRXQ6PP77 449 aa7□□□□□ -1.29
SNX13-208ENST00000482558 PPP1R32Q7Z5V6 425 aa7□□□□□ -1.29
SNX13-208ENST00000482558 OR9A4Q8NGU2 314 aa7□□□□□ -1.29
SNX13-208ENST00000482558 OR4Q3Q8NH05 313 aa7□□□□□ -1.29
SNX13-208ENST00000482558 LMX1AQ8TE12 382 aa7□□□□□ -1.29
SNX13-208ENST00000482558 PATE1Q8WXA2 126 aa7□□□□□ -1.29
SNX13-208ENST00000482558 SAMD8Q96LT4 415 aa7□□□□□ -1.29
SNX13-208ENST00000482558 SLC46A1Q96NT5 459 aa7□□□□□ -1.29
SNX13-208ENST00000482558 HIST1H2AAQ96QV6 131 aa7□□□□□ -1.29
SNX13-208ENST00000482558 INTS14Q96SY0 518 aa7□□□□□ -1.29
SNX13-208ENST00000482558 SRSF8Q9BRL6 282 aaKnown RBP7□□□□□ -1.29
SNX13-208ENST00000482558 PIMREGQ9BSJ6 248 aa7□□□□□ -1.29
SNX13-208ENST00000482558 TCEAL2Q9H3H9 227 aaPredicted RBP7□□□□□ -1.29
SNX13-208ENST00000482558 ANKRA2Q9H9E1 313 aa7□□□□□ -1.29
SNX13-208ENST00000482558 CTPS2Q9NRF8 586 aa7□□□□□ -1.29
SNX13-208ENST00000482558 RHBDL2Q9NX52 303 aa7□□□□□ -1.29
SNX13-208ENST00000482558 BABAM2Q9NXR7 383 aa7□□□□□ -1.29
SNX13-208ENST00000482558 WNT16Q9UBV4 365 aa7□□□□□ -1.29
SNX13-208ENST00000482558 Q9UFV3 132 aa7□□□□□ -1.29
SNX13-208ENST00000482558 ZNF229Q9UJW7 825 aa7□□□□□ -1.29
SNX13-208ENST00000482558 SERTAD3Q9UJW9 196 aa7□□□□□ -1.29
SNX13-208ENST00000482558 SLC45A2Q9UMX9 530 aa7□□□□□ -1.29
SNX13-208ENST00000482558 SIGLEC7Q9Y286 467 aa7□□□□□ -1.29
SNX13-208ENST00000482558 SLC6A5Q9Y345 797 aa7□□□□□ -1.29
SNX13-208ENST00000482558 MRPS2Q9Y399 296 aaKnown RBP7□□□□□ -1.29
SNX13-208ENST00000482558 GRIP1Q9Y3R0 1128 aa7□□□□□ -1.29
SNX13-208ENST00000482558 CMAHPQ9Y471 501 aa7□□□□□ -1.29
SNX13-208ENST00000482558 OR10H1Q9Y4A9 318 aa7□□□□□ -1.29
SNX13-208ENST00000482558 NOX1Q9Y5S8 564 aa7□□□□□ -1.29
SNX13-208ENST00000482558 ARHGEF17Q96PE2 2063 aaPredicted RBP7□□□□□ -1.29
SNX13-208ENST00000482558 A0A0A6YYC8 382 aaPredicted RBP6.99□□□□□ -1.29
SNX13-208ENST00000482558 C2orf92A0A1B0GVN3 265 aa6.99□□□□□ -1.29
SNX13-208ENST00000482558 LINC00854A0A1B0GVQ3 168 aa6.99□□□□□ -1.29
SNX13-208ENST00000482558 A0A1B0GWA3 101 aa6.99□□□□□ -1.29
SNX13-208ENST00000482558 SERINC4A6NH21 518 aa6.99□□□□□ -1.29
SNX13-208ENST00000482558 H3BQ06 376 aaPredicted RBP6.99□□□□□ -1.29
SNX13-208ENST00000482558 I3L1I5 382 aaPredicted RBP6.99□□□□□ -1.29
SNX13-208ENST00000482558 J3QRE1 110 aa6.99□□□□□ -1.29
SNX13-208ENST00000482558 IMPA2O14732 288 aa6.99□□□□□ -1.29
SNX13-208ENST00000482558 TOX3O15405 576 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms