RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 PMS2P3Q13401 168 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 NFYCQ13952 458 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 CYLC2Q14093 348 aaPredicted RBP8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 ZNF74Q16587 644 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 CYP51A1Q16850 503 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 TRMT5Q32P41 509 aaKnown RBP8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 ENTPD8Q5MY95 495 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 CGB2Q6NT52 195 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 CLEC2AQ6UVW9 174 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 MYPOPQ86VE0 399 aaPredicted RBP8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 RBM45Q8IUH3 476 aaKnown RBP8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 UEVLDQ8IX04 471 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 GPR137CQ8N3F9 429 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 ZNF525Q8N782 197 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 OR8J3Q8NGG0 315 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 OR10A6Q8NH74 314 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 OR6X1Q8NH79 312 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 ADAMTS16Q8TE57 1224 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 C10orf82Q8WW14 230 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 LRRC58Q96CX6 371 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 MPP4Q96JB8 637 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 TNFRSF13CQ96RJ3 184 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 SEPHS2Q99611 448 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 PRSS27Q9BQR3 290 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 ASPNQ9BXN1 380 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 SEC61A2Q9H9S3 476 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 SAR1AQ9NR31 198 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 ZNF224Q9NZL3 707 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 SELENONQ9NZV5 590 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 SLC13A4Q9UKG4 626 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 PMF1-BGLAPU3KQ54 211 aa8.43□□□□□ -1.06
TMEM39A-207ENST00000482162 FBN3Q75N90 2809 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 CELA3BP08861 270 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 OR4A8P0C604 315 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 TSPAN19P0C672 248 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 ZNF35P13682 527 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 CBLP22681 906 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 NCALDP61601 193 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 TUBA1BP68363 451 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 TUBA4AP68366 448 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 POU3F1Q03052 451 aaPredicted RBP8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 KLF10Q13118 480 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 TMEM249Q2WGJ8 235 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 INTS11Q5TA45 600 aaKnown RBP8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 LRFN4Q6PJG9 635 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 TUBA1AQ71U36 451 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 MDP1Q86V88 176 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 OR5J2Q8NH18 312 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 LIPHQ8WWY8 451 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 FAM168AQ92567 244 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 TMEM54Q969K7 222 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 ZNF583Q96ND8 569 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 SORCS2Q96PQ0 1159 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 MDFIQ99750 246 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 SH3GL1Q99961 368 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 EMC6Q9BV81 110 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 DENND2DQ9H6A0 471 aaPredicted RBP8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 MEPEQ9NQ76 525 aaPredicted RBP8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 MED29Q9NX70 200 aa8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 FBXO9Q9UK97 447 aaPredicted RBP8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 FBN1P35555 2871 aaKnown RBP8.42□□□□□ -1.06
TMEM39A-207ENST00000482162 IGHV2OR16-5A0A0B4J2B6 119 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 M0R3G1 203 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 NDUFS8O00217 210 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 RRP9O43818 475 aaKnown RBP8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 CCDC22O60826 627 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 LY6HO94772 140 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 OPN1SWP03999 348 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 IFNGR1P15260 489 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 NQO1P15559 274 aaKnown RBP8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 ZNF14P17017 642 aaPredicted RBP8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 NR4A1P22736 598 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 GIFP27352 417 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 THBS4P35443 961 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 EVX1P49640 407 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 PPOXP50336 477 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 ZNF133P52736 654 aaPredicted RBP8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 HIST3H3Q16695 136 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 RABL3Q5HYI8 236 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 SLC46A3Q7Z3Q1 461 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 LRRC17Q8N6Y2 441 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 RASSF5Q8WWW0 418 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 HTRA1Q92743 480 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 FBXO17Q96EF6 278 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 MRPL13Q9BYD1 178 aaKnown RBP8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 POLR2J2Q9GZM3 115 aaKnown RBP8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 POLR2J3Q9H1A7 115 aaKnown RBP8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 NOX3Q9HBY0 568 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 TMEM160Q9NX00 188 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 ZNF229Q9UJW7 825 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 USP22Q9UPT9 525 aa8.41□□□□□ -1.06
TMEM39A-207ENST00000482162 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.4□□□□□ -1.067e-8■■■■■ 31.3
TMEM39A-207ENST00000482162 MALRD1Q5VYJ5 2156 aa8.4□□□□□ -1.06
TMEM39A-207ENST00000482162 LOC390937A0A1W2PQ73 354 aa8.4□□□□□ -1.06
TMEM39A-207ENST00000482162 CPSF4LA6NMK7 179 aaKnown RBP8.4□□□□□ -1.06
TMEM39A-207ENST00000482162 ZNF726A6NNF4 738 aa8.4□□□□□ -1.06
TMEM39A-207ENST00000482162 BBIP1A8MTZ0 92 aa8.4□□□□□ -1.06
TMEM39A-207ENST00000482162 A8MV72 311 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-207ENST00000482162 SLC22A2O15244 555 aa8.4□□□□□ -1.06
TMEM39A-207ENST00000482162 CH25HO95992 272 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms