RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 Q8N9L7 120 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 OR1N2Q8NGR9 330 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 OR2G3Q8NGZ4 309 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 TMEM59Q9BXS4 323 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 DNTTIP1Q9H147 329 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 EXD2Q9NVH0 621 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 PISDQ9UG56 409 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 NUFIP1Q9UHK0 495 aaKnown RBP3.6□□□□□ -1.83
SF3B1-210ENST00000482158 HEBP2Q9Y5Z4 205 aa3.6□□□□□ -1.83
SF3B1-210ENST00000482158 PES1O00541 588 aaKnown RBP3.59□□□□□ -1.83
SF3B1-210ENST00000482158 PALMO75781 387 aa3.59□□□□□ -1.83
SF3B1-210ENST00000482158 CST1P01037 141 aa3.59□□□□□ -1.83
SF3B1-210ENST00000482158 IGLV2-23P01705 113 aa3.59□□□□□ -1.83
SF3B1-210ENST00000482158 IGHV3-43DP0DP04 118 aa3.59□□□□□ -1.83
SF3B1-210ENST00000482158 SLC2A3P11169 496 aa3.59□□□□□ -1.83
SF3B1-210ENST00000482158 NCF2P19878 526 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-210ENST00000482158 UCNP55089 124 aa3.59□□□□□ -1.83
SF3B1-210ENST00000482158 BST2Q10589 180 aaKnown RBP3.59□□□□□ -1.83
SF3B1-210ENST00000482158 TMEM255AQ5JRV8 349 aa3.59□□□□□ -1.83
SF3B1-210ENST00000482158 UBE2J2Q8N2K1 259 aa3.59□□□□□ -1.83
SF3B1-210ENST00000482158 OR9K2Q8NGE7 335 aa3.59□□□□□ -1.83
SF3B1-210ENST00000482158 DTX3LQ8TDB6 740 aa3.59□□□□□ -1.83
SF3B1-210ENST00000482158 GIMAP1Q8WWP7 306 aa3.59□□□□□ -1.83
SF3B1-210ENST00000482158 IFT74Q96LB3 600 aa3.59□□□□□ -1.83
SF3B1-210ENST00000482158 RBAKQ9NYW8 714 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-210ENST00000482158 DEC1Q9P2X7 70 aa3.59□□□□□ -1.83
SF3B1-210ENST00000482158 GNPTGQ9UJJ9 305 aa3.59□□□□□ -1.83
SF3B1-210ENST00000482158 MAP3K15Q6ZN16 1313 aa3.59□□□□□ -1.83
SF3B1-210ENST00000482158 MSH6P52701 1360 aa3.59□□□□□ -1.83
SF3B1-210ENST00000482158 TET2Q6N021 2002 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-210ENST00000482158 A0A1B0GVI7 797 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 ZNF726A6NNF4 738 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 LAD1O00515 517 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 PEX7O00628 323 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 MGRN1O60291 552 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 PBLDP30039 288 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-210ENST00000482158 HNRNPH3P31942 346 aaKnown RBP3.58□□□□□ -1.84
SF3B1-210ENST00000482158 CASP14P31944 242 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 ATP5C1P36542 298 aaKnown RBP3.58□□□□□ -1.84
SF3B1-210ENST00000482158 HSD17B2P37059 387 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 NMUP48645 174 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 RFX4Q33E94 735 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 KCTD21Q4G0X4 260 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 KDM7AQ6ZMT4 941 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 LRRC74BQ6ZQY2 392 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 ASCL5Q7RTU5 278 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 LHFPL3Q86UP9 236 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 CDR2LQ86X02 465 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-210ENST00000482158 SLC22A9Q8IVM8 553 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 ENTHD1Q8IYW4 607 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 MARCH1Q8TCQ1 289 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 MCOLN3Q8TDD5 553 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 FAM210BQ96KR6 192 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 HSFY1Q96LI6 401 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 SH3GL1Q99961 368 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 RARRES2Q99969 163 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 HDHD3Q9BSH5 251 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-210ENST00000482158 MRPL47Q9HD33 250 aaKnown RBP3.58□□□□□ -1.84
SF3B1-210ENST00000482158 SLCO1B3Q9NPD5 702 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 STOX2Q9P2F5 926 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-210ENST00000482158 PACSIN2Q9UNF0 486 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-210ENST00000482158 CSDC2Q9Y534 153 aaKnown RBP3.58□□□□□ -1.84
SF3B1-210ENST00000482158 N6AMT1Q9Y5N5 214 aa3.58□□□□□ -1.84
SF3B1-210ENST00000482158 PSTPIP1O43586 416 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 SS18L1O75177 396 aaPredicted RBP3.57□□□□□ -1.84
SF3B1-210ENST00000482158 SUPT3HO75486 399 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 CSF3P09919 207 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 HPGDP15428 266 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 SLC2A5P22732 501 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 SLC26A3P40879 764 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 SUB1P53999 127 aaKnown RBP eCLIP3.57□□□□□ -1.84
SF3B1-210ENST00000482158 KCNJ2P63252 427 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 MADCAM1Q13477 382 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 AQP6Q13520 282 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 PIGGQ5H8A4 983 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 VAX1Q5SQQ9 334 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 C19orf35Q6ZS72 473 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 C6orf120Q7Z4R8 191 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 CAMK2N1Q7Z7J9 78 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 SLC22A8Q8TCC7 542 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 SGK3Q96BR1 496 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 ASB9Q96DX5 294 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 MED8Q96G25 268 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 AURKBQ96GD4 344 aaPredicted RBP3.57□□□□□ -1.84
SF3B1-210ENST00000482158 CDC42EP4Q9H3Q1 356 aaKnown RBP3.57□□□□□ -1.84
SF3B1-210ENST00000482158 KLHL28Q9NXS3 571 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 ZNF226Q9NYT6 803 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 IKZF2Q9UKS7 526 aa3.57□□□□□ -1.84
SF3B1-210ENST00000482158 CEMIPQ8WUJ3 1361 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 XKRY2A2RUG3 117 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 H0Y8G0 127 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 SNX4O95219 450 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 NDUFB10O96000 172 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 C2P06681 752 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 UQCRFS1P1P0C7P4 283 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 TFPI2P48307 235 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 SULT1E1P49888 294 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 TMEM183BQ1AE95 376 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 AGBL2Q5U5Z8 902 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 LYPD2Q6UXB3 125 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms