RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 RNF113BQ8IZP6 322 aaKnown RBP6.07□□□□□ -1.44
BRCA1-215ENST00000478531 TMEM123Q8N131 208 aa6.07□□□□□ -1.44
BRCA1-215ENST00000478531 OR4K5Q8NGD3 323 aa6.07□□□□□ -1.44
BRCA1-215ENST00000478531 OR6N1Q8NGY5 312 aa6.07□□□□□ -1.44
BRCA1-215ENST00000478531 OR52N5Q8NH56 324 aa6.07□□□□□ -1.44
BRCA1-215ENST00000478531 ZNF347Q96SE7 839 aa6.07□□□□□ -1.44
BRCA1-215ENST00000478531 POLDIP3Q9BY77 421 aaKnown RBP6.07□□□□□ -1.44
BRCA1-215ENST00000478531 MAGIXQ9H6Y5 334 aa6.07□□□□□ -1.44
BRCA1-215ENST00000478531 CRLF2Q9HC73 371 aa6.07□□□□□ -1.44
BRCA1-215ENST00000478531 KRCC1Q9NPI7 259 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-215ENST00000478531 INIPQ9NRY2 104 aa6.07□□□□□ -1.44
BRCA1-215ENST00000478531 SLC7A8Q9UHI5 535 aa6.07□□□□□ -1.44
BRCA1-215ENST00000478531 POMPQ9Y244 141 aa6.07□□□□□ -1.44
BRCA1-215ENST00000478531 A0A096LPE4 126 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 LOC102725191A0A1B0GVB3 256 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 A0A1W2PPZ6 126 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 DHRS12A0PJE2 317 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 SH3PXD2BA1X283 911 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 OR6C65A6NJZ3 312 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 PDLIM1O00151 329 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 SIAH2O43255 324 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 OR10H3O60404 316 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 CTAG2O75638 210 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 SEC14L2O76054 403 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 BCL10O95999 233 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 RAP2AP10114 183 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 CRYGSP22914 178 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 RPL4P36578 427 aaKnown RBP6.06□□□□□ -1.44
BRCA1-215ENST00000478531 MAGEA2P43356 314 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 CSNK1A1P48729 337 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 PCYT1AP49585 367 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 TGFBR3Q03167 851 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 ZP4Q12836 540 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 PPP1R8Q12972 351 aaKnown RBP6.06□□□□□ -1.44
BRCA1-215ENST00000478531 PPA1Q15181 289 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 CEACAM16Q2WEN9 425 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 HIKESHIQ53FT3 197 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 ALG10Q5BKT4 473 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 PHYHD1Q5SRE7 291 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 KLHL24Q6TFL4 600 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 CANT1Q8WVQ1 401 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 HSD17B8Q92506 261 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 NRGNQ92686 78 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 MUCL1Q96DR8 90 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 RSRC1Q96IZ7 334 aaKnown RBP6.06□□□□□ -1.44
BRCA1-215ENST00000478531 DHRS1Q96LJ7 313 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 ALPK1Q96QP1 1244 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 ULBP2Q9BZM5 246 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 LRMDAQ9H2I8 198 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 GPR35Q9HC97 309 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 B3GAT2Q9NPZ5 323 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 RASSF1Q9NS23 344 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 IL20RAQ9UHF4 553 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 TMCC3Q9ULS5 477 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 TMEM5Q9Y2B1 443 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 U3KQV3 271 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 ITPR3Q14573 2671 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 OR5H1A6NKK0 313 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 AQP12BA6NM10 295 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 DEFB108AA8MXU0 73 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 TNFRSF11BO00300 401 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 EBAG9O00559 213 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 GPR37O15354 613 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 CAPZA2P47755 286 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 OMPP47874 163 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 SLC9A3P48764 834 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 DAP3P51398 398 aaKnown RBP6.06□□□□□ -1.44
BRCA1-215ENST00000478531 CLRN1P58418 232 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 RPS4XP62701 263 aaKnown RBP6.06□□□□□ -1.44
BRCA1-215ENST00000478531 MYBPC1Q00872 1141 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 DAZAP2Q15038 168 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-215ENST00000478531 GABRA6Q16445 453 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 ACKR1Q16570 336 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 C1orf146Q5VVC0 180 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 OR7E24Q6IFN5 339 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 PIWIL3Q7Z3Z3 882 aaKnown RBP6.06□□□□□ -1.44
BRCA1-215ENST00000478531 AQP12AQ8IXF9 295 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 C20orf196Q8IYI0 205 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 ADGRG5Q8IZF4 528 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 SYT14Q8NB59 555 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 OR9Q2Q8NGE9 314 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 FANK1Q8TC84 345 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 LIPHQ8WWY8 451 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 ASB10Q8WXI3 467 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 ZNF566Q969W8 418 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 ZNF837Q96EG3 531 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-215ENST00000478531 PLPPR2Q96GM1 343 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 SLC25A44Q96H78 314 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-215ENST00000478531 LURAP1Q96LR2 239 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 TNFRSF13CQ96RJ3 184 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 C1QTNF6Q9BXI9 259 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 LINC00470Q9BZP3 86 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 OR10A4Q9H209 315 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 VNN3Q9NY84 501 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 HIF3AQ9Y2N7 669 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 LYVE1Q9Y5Y7 322 aa6.06□□□□□ -1.44
BRCA1-215ENST00000478531 DSCAMO60469 2012 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-215ENST00000478531 HTR3EA5X5Y0 456 aa6.05□□□□□ -1.44
BRCA1-215ENST00000478531 UNC119BA6NIH7 251 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms