RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	IGKV3-15	P01624	115 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	IGLV1-44	P01699	117 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	CECR9	P0C854	216 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	UMPS	P11172	480 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	COX4I1	P13073	169 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	IFNGR1	P15260	489 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	TNFRSF1B	P20333	461 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	ARR3	P36575	388 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	CAPZA2	P47755	286 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	OR1E2	P47887	323 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	BID	P55957	195 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	LRRC23	Q53EV4	343 aa	Predicted RBP	12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	CYBRD1	Q53TN4	286 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	SLC35D2	Q76EJ3	337 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	LRRC17	Q8N6Y2	441 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	OR6X1	Q8NH79	312 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	TPD52L3	Q96J77	140 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	PRSS27	Q9BQR3	290 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	RHNO1	Q9BSD3	238 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	REG4	Q9BYZ8	158 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	EFCAB1	Q9HAE3	211 aa		12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	MEPE	Q9NQ76	525 aa	Predicted RBP	12.01	□□□□□ -0.49
HDAC7-222	ENST00000477937	YLPM1	P49750	1951 aa	Known RBP	12	□□□□□ -0.49
HDAC7-222	ENST00000477937	BLOC1S5-TXNDC5	H3BN57	136 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937		H7C417	338 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	SEC14L2	O76054	403 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	MT-ND1	P03886	318 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	ASAH2B	P0C7U1	165 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	THRB	P10828	461 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	RBM34	P42696	430 aa	Known RBP	12	□□□□□ -0.49
HDAC7-222	ENST00000477937	CSNK1A1	P48729	337 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	SELENOW	P63302	87 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	PIN1	Q13526	163 aa	Predicted RBP	12	□□□□□ -0.49
HDAC7-222	ENST00000477937	DNM1P46	Q6ZS02	220 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	NANOGNB	Q7Z5D8	188 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	MDP1	Q86V88	176 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	NKAIN4	Q8IVV8	208 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	IL17RD	Q8NFM7	739 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	OR4F15	Q8NGB8	312 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	LZIC	Q8WZA0	190 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	FBXO17	Q96EF6	278 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	HOPX	Q9BPY8	73 aa	Predicted RBP	12	□□□□□ -0.49
HDAC7-222	ENST00000477937	CA10	Q9NS85	328 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	CMTM6	Q9NX76	183 aa		12	□□□□□ -0.49
HDAC7-222	ENST00000477937	CHD3	Q12873	2000 aa	Known RBP	11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	NF1	P21359	2839 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	VSTM5	A8MXK1	200 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	IGF2	P01344	180 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	CD79A	P11912	226 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	FUT1	P19526	365 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	CALCR	P30988	508 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	IFNA8	P32881	189 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	SERPINF1	P36955	418 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	IDH3G	P51553	393 aa	Predicted RBP	11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	DSCR9	P59020	149 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	LIPE	Q05469	1076 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	NPRL3	Q12980	569 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	SWI5	Q1ZZU3	235 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	MST1L	Q2TV78	715 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	CLEC2A	Q6UVW9	174 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	ZNF813	Q6ZN06	617 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	ZNF627	Q7L945	461 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	SLC46A3	Q7Z3Q1	461 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	WDFY1	Q8IWB7	410 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	SLC15A3	Q8IY34	581 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	MAPK1IP1L	Q8NDC0	245 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	TMEM255B	Q8WV15	326 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	TMEM239	Q8WW34	195 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	NANOS1	Q8WY41	292 aa	Known RBP	11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	HTRA1	Q92743	480 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	ZNF566	Q969W8	418 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	SGTB	Q96EQ0	304 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	FOXB1	Q99853	325 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	ELAC2	Q9BQ52	826 aa	Known RBP	11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	SEC61A2	Q9H9S3	476 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	B3GNT2	Q9NY97	397 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937	GLTP	Q9NZD2	209 aa		11.99	□□□□□ -0.49
HDAC7-222	ENST00000477937		A0A1W2PRG6	482 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	ZNF503-AS2	A6NEH8	195 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	GSTA4	O15217	222 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	PDE5A	O76074	875 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	OR7A10	O76100	309 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	BCL10	O95999	233 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	HLA-H	P01893	362 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	TP53	P04637	393 aa	Predicted RBP	11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	CELA3B	P08861	270 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	B4GALT1	P15291	398 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	SLC7A2	P52569	658 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	EFNA4	P52798	201 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	UGT2B15	P54855	530 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	SNRPD2	P62316	118 aa	Known RBP	11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	PPP2R2B	Q00005	443 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	PIGF	Q07326	219 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	ST3GAL3	Q11203	375 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	MELK	Q14680	651 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	GSG1	Q2KHT4	349 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	VHLL	Q6RSH7	139 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	PIWIL3	Q7Z3Z3	882 aa	Known RBP	11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	SPATA21	Q7Z572	469 aa		11.98	□□□□□ -0.49
HDAC7-222	ENST00000477937	NUP37	Q8NFH4	326 aa		11.98	□□□□□ -0.49

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