RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 UROSP10746 265 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 PVRP15151 417 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 EZRP15311 586 aaKnown RBP3.23□□□□□ -1.89
UBR3-209ENST00000477461 CSRP1P21291 193 aaKnown RBP3.23□□□□□ -1.89
UBR3-209ENST00000477461 CD1CP29017 333 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 PEBP1P30086 187 aaKnown RBP3.23□□□□□ -1.89
UBR3-209ENST00000477461 SERPINB1P30740 379 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 OR3A3P47888 321 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 ACADVLP49748 655 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 NOVA1P51513 510 aaKnown RBP3.23□□□□□ -1.89
UBR3-209ENST00000477461 RAP1GDS1P52306 607 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 GFERP55789 205 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 RPS15AP62244 130 aaKnown RBP3.23□□□□□ -1.89
UBR3-209ENST00000477461 CSNK1G2P78368 415 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 REEP5Q00765 189 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 RGS1Q08116 209 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 TGM3Q08188 693 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 DDX39BQ13838 428 aaKnown RBP3.23□□□□□ -1.89
UBR3-209ENST00000477461 DOC2AQ14183 400 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 LY6DQ14210 128 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 GGTA1PQ4G0N0 100 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 LBHQ53QV2 105 aaPredicted RBP3.23□□□□□ -1.89
UBR3-209ENST00000477461 FGD3Q5JSP0 725 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 PET117Q6UWS5 81 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 BTNL8Q6UX41 500 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 TMIGD1Q6UXZ0 262 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 Q6ZR54 194 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 RGS9BPQ6ZS82 235 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 PRSS42Q7Z5A4 293 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 KRT77Q7Z794 578 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 SYVN1Q86TM6 617 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 LRRC34Q8IZ02 419 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 CHCHD4Q8N4Q1 142 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 ZNF781Q8N8C0 355 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 LRTM2Q8N967 370 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 TTC29Q8NA56 475 aaPredicted RBP3.23□□□□□ -1.89
UBR3-209ENST00000477461 TRPV3Q8NET8 790 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 OR4F6Q8NGB9 312 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 OR4D9Q8NGE8 314 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 OR52B6Q8NGF0 335 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 AGAP11Q8TF27 550 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 SELENOMQ8WWX9 145 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 CHMP6Q96FZ7 201 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 C2orf48Q96LS8 159 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 OR4K3Q96R72 315 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 NRTNQ99748 197 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 CCT7Q99832 543 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 SIKE1Q9BRV8 207 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 STRADBQ9C0K7 418 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 SLC7A5P2Q9GIP4 190 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 FAM107BQ9H098 131 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 EHD1Q9H4M9 534 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 NT5DC2Q9H857 520 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 RNF121Q9H920 327 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 FGFR1OP2Q9NVK5 253 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 TEX10Q9NXF1 929 aaPredicted RBP3.23□□□□□ -1.89
UBR3-209ENST00000477461 AHSPQ9NZD4 102 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 MARCOQ9UEW3 520 aaPredicted RBP3.23□□□□□ -1.89
UBR3-209ENST00000477461 ZNF490Q9ULM2 529 aaPredicted RBP3.23□□□□□ -1.89
UBR3-209ENST00000477461 PLCL2Q9UPR0 1127 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 RNF11Q9Y3C5 154 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 TIMM22Q9Y584 194 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 PCDHGA1Q9Y5H4 931 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 KLK4Q9Y5K2 254 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 U3KQA8 63 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 FAM186AA6NE01 2351 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 EP300Q09472 2414 aaPredicted RBP3.22□□□□□ -1.89
UBR3-209ENST00000477461 IGHV5-51A0A0C4DH38 117 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 A0A0G2JND7 137 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 IGHV5-10-1A0A0J9YXX1 117 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 SPAARA0A1B0GVQ0 90 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 GMNCA6NCL1 334 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 EFCAB7A8K855 629 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 NPIPB9F8W1W9 429 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 H0YIV9 168 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 SLC28A1O00337 649 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 UBFD1O14562 309 aaKnown RBP3.22□□□□□ -1.89
UBR3-209ENST00000477461 HAT1O14929 419 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 SURF4O15260 269 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 HDAC3O15379 428 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 SRPX2O60687 465 aaPredicted RBP3.22□□□□□ -1.89
UBR3-209ENST00000477461 EDF1O60869 148 aaKnown RBP3.22□□□□□ -1.89
UBR3-209ENST00000477461 SNNO75324 88 aaPredicted RBP3.22□□□□□ -1.89
UBR3-209ENST00000477461 SH3BGRLO75368 114 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 OR2B3O76000 313 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 TGDSO95455 350 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 PDYNP01213 254 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 SERPINA6P08185 405 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 FGF4P08620 206 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 KRTAP1-4P0C5Y4 121 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 ANKRD34CP0C6C1 535 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 LINC00032P0C843 101 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 THRAP10827 490 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 PRG2P13727 222 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 NELFEP18615 380 aaKnown RBP3.22□□□□□ -1.89
UBR3-209ENST00000477461 CLDN17P56750 224 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 VSX2P58304 361 aaPredicted RBP3.22□□□□□ -1.89
UBR3-209ENST00000477461 ERVPABLB-1P60509 514 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 STXBP1P61764 594 aaKnown RBP3.22□□□□□ -1.89
UBR3-209ENST00000477461 PPP1CAP62136 330 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms