RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 FXYD1O00168 92 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 SEC14L2O76054 403 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 LY6HO94772 140 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 CH25HO95992 272 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 CELA3BP08861 270 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 ADORA3P0DMS8 318 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 TROVE2P10155 538 aaKnown RBP eCLIP9.36□□□□□ -0.91
SEC13-214ENST00000476597 IDH3GP51553 393 aaPredicted RBP9.36□□□□□ -0.91
SEC13-214ENST00000476597 SNRPD2P62316 118 aaKnown RBP9.36□□□□□ -0.91
SEC13-214ENST00000476597 KLF10Q13118 480 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 CAMK2DQ13557 499 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 EFNB3Q15768 340 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 RABL3Q5HYI8 236 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 CGB2Q6NT52 195 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 MDP1Q86V88 176 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 MYPOPQ86VE0 399 aaPredicted RBP9.36□□□□□ -0.91
SEC13-214ENST00000476597 LRRC17Q8N6Y2 441 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 OR8J3Q8NGG0 315 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 OR6N1Q8NGY5 312 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 ZNF75AQ96N20 296 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 ZNF583Q96ND8 569 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 ECSITQ9BQ95 431 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 PRSS27Q9BQR3 290 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 ZNF442Q9H7R0 627 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 B3GAT2Q9NPZ5 323 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 SAR1AQ9NR31 198 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 YAE1D1Q9NRH1 226 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 SLC7A7Q9UM01 511 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 USP22Q9UPT9 525 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 POFUT2Q9Y2G5 429 aa9.36□□□□□ -0.91
SEC13-214ENST00000476597 CUBNO60494 3623 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 LOC100653049A0A140TA62 436 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 TMEM129A0AVI4 362 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 VWC2LB2RUY7 222 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 C11orf98E9PRG8 122 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 SERPINI2O75830 405 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 KRT34O76011 436 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 OR6A2O95222 327 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 HLA-HP01893 362 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 CSF3P09919 207 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 ASAH2BP0C7U1 165 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 IFNGR1P15260 489 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 THBS4P35443 961 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 CAPZA2P47755 286 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 BIDP55957 195 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 VLDLRP98155 873 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 TMEM249Q2WGJ8 235 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 MMEL1Q495T6 779 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 REP15Q6BDI9 236 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 VHLLQ6RSH7 139 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 ZNF813Q6ZN06 617 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 SLC35D2Q76EJ3 337 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 SNX32Q86XE0 403 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 HIPK1Q86Z02 1210 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 OR6X1Q8NH79 312 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 C10orf82Q8WW14 230 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 TMEM54Q969K7 222 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 SORCS2Q96PQ0 1159 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 DOK1Q99704 481 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 FOXB1Q99853 325 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 ULBP2Q9BZM5 246 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 DENND2DQ9H6A0 471 aaPredicted RBP9.35□□□□□ -0.91
SEC13-214ENST00000476597 MEPEQ9NQ76 525 aaPredicted RBP9.35□□□□□ -0.91
SEC13-214ENST00000476597 NANSQ9NR45 359 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 FGFR1OP2Q9NVK5 253 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 ZNF229Q9UJW7 825 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 FBXO9Q9UK97 447 aaPredicted RBP9.35□□□□□ -0.91
SEC13-214ENST00000476597 SH3GLB1Q9Y371 365 aa9.35□□□□□ -0.91
SEC13-214ENST00000476597 BBIP1A8MTZ0 92 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 A8MV72 311 aaPredicted RBP9.34□□□□□ -0.91
SEC13-214ENST00000476597 NDUFS8O00217 210 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 MRASO14807 208 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 HIST1H2ABP04908 130 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 ZNF14P17017 642 aaPredicted RBP9.34□□□□□ -0.91
SEC13-214ENST00000476597 NPR2P20594 1047 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 USF1P22415 310 aaPredicted RBP9.34□□□□□ -0.91
SEC13-214ENST00000476597 NR4A1P22736 598 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 CSNK1A1P48729 337 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 PPOXP50336 477 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 PDLIM4P50479 330 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 RAB1AP62820 205 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 PIGFQ07326 219 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 SF3A3Q12874 501 aaKnown RBP eCLIP9.34□□□□□ -0.915e-7■■■□□ 16.9
SEC13-214ENST00000476597 NPRL3Q12980 569 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 MAPRE2Q15555 327 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 GSG1Q2KHT4 349 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 ERICH5Q6P6B1 374 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 LRFN4Q6PJG9 635 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 HIST3H2AQ7L7L0 130 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 SLC46A3Q7Z3Q1 461 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 PIWIL3Q7Z3Z3 882 aaKnown RBP9.34□□□□□ -0.91
SEC13-214ENST00000476597 CARM1Q86X55 608 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 NKAIN4Q8IVV8 208 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 ANKS4BQ8N8V4 417 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 HIST1H2ACQ93077 130 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 SLC25A44Q96H78 314 aaPredicted RBP9.34□□□□□ -0.91
SEC13-214ENST00000476597 MS4A3Q96HJ5 214 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 MDFIQ99750 246 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 VRK1Q99986 396 aaPredicted RBP9.34□□□□□ -0.91
SEC13-214ENST00000476597 POLR2J2Q9GZM3 115 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms