RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 SELENOIQ9C0D9 397 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 RAB6CQ9H0N0 254 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 XYLT2Q9H1B5 865 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 ARV1Q9H2C2 271 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 DHX35Q9H5Z1 703 aaKnown RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 PLEKHA2Q9HB19 425 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 SLC52A3Q9NQ40 469 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 ACSS2Q9NR19 701 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 HEBP1Q9NRV9 189 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 PLEK2Q9NYT0 353 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 HSPB7Q9UBY9 170 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 CNTN6Q9UQ52 1028 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 YARS2Q9Y2Z4 477 aaKnown RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 FIS1Q9Y3D6 152 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 PCYT1BQ9Y5K3 369 aaPredicted RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 NUP188Q5SRE5 1749 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 DOT1LQ8TEK3 1739 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 A0A096LPE4 126 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 A0A1W2PNV4 684 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 A0A1W2PPZ6 126 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 C7orf77A4D0Y5 90 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 ZNF705GA8MUZ8 300 aaPredicted RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 SNRPGP15A8MWD9 76 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 CXCR6O00574 342 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 SCDO00767 359 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 SOCS6O14544 535 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 MAGEB4O15481 346 aaPredicted RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 BCL2L11O43521 198 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 LANCL1O43813 399 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 CDC40O60508 579 aaKnown RBP eCLIP3.8□□□□□ -1.8
CD55-208ENST00000476590 CREBL2O60519 120 aaPredicted RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 MSCO60682 206 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 RAMP3O60896 148 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 METTL18O95568 372 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 TOMM40O96008 361 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 MBPP02686 304 aaPredicted RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 RLN1P04808 185 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 HLA-DOAP06340 250 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 SBK3P0C264 359 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 ANKRD34CP0C6C1 535 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 SFTA3P0C7M3 94 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 UQCRFS1P1P0C7P4 283 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 PIPP12273 146 aaPredicted RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 HOXB2P14652 356 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 ACHEP22303 614 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 CST5P28325 142 aaPredicted RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 RBMS1P29558 406 aaKnown RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 ARL3P36405 182 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 RPS10P46783 165 aaKnown RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 AVPR1BP47901 424 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 RPL29P47914 159 aaKnown RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 RFX3P48380 749 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 SUMO3P55854 103 aaPredicted RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 NRG3P56975 720 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 SRSF3P84103 164 aaKnown RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 PSG6Q00889 435 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 TMEM115Q12893 351 aaPredicted RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 MLLT11Q13015 90 aaPredicted RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 TNFAIP1Q13829 316 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 TMEM132DQ14C87 1099 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 TAZQ16635 292 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 TMEM241Q24JQ0 296 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 C1orf194Q5T5A4 169 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 ZNF648Q5T619 568 aaPredicted RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 AGBL4Q5VU57 503 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 PLAG1Q6DJT9 500 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 TCTN3Q6NUS6 607 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 CHST9Q7L1S5 443 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 SLC35E3Q7Z769 313 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 MRPL41Q8IXM3 137 aaKnown RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 EXD3Q8N9H8 876 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 HJURPQ8NCD3 748 aaPredicted RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 MDGA1Q8NFP4 955 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 OR4A4PQ8NGN8 299 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 CXorf40AQ8TE69 158 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 MITD1Q8WV92 249 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 TSEN15Q8WW01 171 aaKnown RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 ZCCHC14Q8WYQ9 949 aaKnown RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 FAM162AQ96A26 154 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 RPUSD4Q96CM3 377 aaKnown RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 RTP4Q96DX8 246 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 TECTBQ96PL2 329 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 EPYCQ99645 322 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 LPAR4Q99677 370 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 HIST1H2BLQ99880 126 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 ATF6BQ99941 703 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 SYT17Q9BSW7 474 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 COLEC11Q9BWP8 271 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 OR2J1Q9GZK6 312 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 SLC25A31Q9H0C2 315 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 DPEP2Q9H4A9 486 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 TMEM27Q9HBJ8 222 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 NOX3Q9HBY0 568 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 CSNK1G1Q9HCP0 422 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 AMBNQ9NP70 447 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 SDR39U1Q9NRG7 319 aaPredicted RBP3.8□□□□□ -1.8
CD55-208ENST00000476590 SLC2A9Q9NRM0 540 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 CA10Q9NS85 328 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 DMAC2Q9NW81 257 aa3.8□□□□□ -1.8
CD55-208ENST00000476590 C1orf109Q9NX04 203 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms