RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ILKAPQ9H0C8 392 aaPredicted RBP4.01□□□□□ -1.77
VPS50-212ENST00000476413 CWH43Q9H720 699 aa4.01□□□□□ -1.77
VPS50-212ENST00000476413 VPS37BQ9H9H4 285 aa4.01□□□□□ -1.77
VPS50-212ENST00000476413 UGT1A7Q9HAW7 530 aa4.01□□□□□ -1.77
VPS50-212ENST00000476413 UGT1A10Q9HAW8 530 aa4.01□□□□□ -1.77
VPS50-212ENST00000476413 UGT1A8Q9HAW9 530 aa4.01□□□□□ -1.77
VPS50-212ENST00000476413 GJE1A6NN92 205 aa4□□□□□ -1.77
VPS50-212ENST00000476413 DLGAP1O14490 977 aa4□□□□□ -1.77
VPS50-212ENST00000476413 INSP01308 110 aa4□□□□□ -1.77
VPS50-212ENST00000476413 TROVE2P10155 538 aaKnown RBP eCLIP4□□□□□ -1.77
VPS50-212ENST00000476413 TDGF1P13385 188 aa4□□□□□ -1.77
VPS50-212ENST00000476413 TNNI1P19237 187 aa4□□□□□ -1.77
VPS50-212ENST00000476413 IFNA8P32881 189 aa4□□□□□ -1.77
VPS50-212ENST00000476413 RORAP35398 523 aa4□□□□□ -1.77
VPS50-212ENST00000476413 TDGF1P3P51864 188 aa4□□□□□ -1.77
VPS50-212ENST00000476413 ACLYP53396 1101 aa4□□□□□ -1.77
VPS50-212ENST00000476413 CKAP4Q07065 602 aaKnown RBP4□□□□□ -1.77
VPS50-212ENST00000476413 FZD2Q14332 565 aa4□□□□□ -1.77
VPS50-212ENST00000476413 PPP1R7Q15435 360 aa4□□□□□ -1.77
VPS50-212ENST00000476413 NPBQ8NG41 125 aa4□□□□□ -1.77
VPS50-212ENST00000476413 OR7G2Q8NG99 324 aa4□□□□□ -1.77
VPS50-212ENST00000476413 OR2G2Q8NGZ5 317 aa4□□□□□ -1.77
VPS50-212ENST00000476413 ACMSDQ8TDX5 336 aa4□□□□□ -1.77
VPS50-212ENST00000476413 RARRES2Q99969 163 aa4□□□□□ -1.77
VPS50-212ENST00000476413 GLRX2Q9NS18 164 aa4□□□□□ -1.77
VPS50-212ENST00000476413 EXD2Q9NVH0 621 aa4□□□□□ -1.77
VPS50-212ENST00000476413 TP53TG5Q9Y2B4 290 aa4□□□□□ -1.77
VPS50-212ENST00000476413 ZNF726A6NNF4 738 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 MGRN1O60291 552 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 RCC1P18754 421 aaPredicted RBP3.99□□□□□ -1.77
VPS50-212ENST00000476413 NSG1P42857 185 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 SUB1P53999 127 aaKnown RBP eCLIP3.99□□□□□ -1.77
VPS50-212ENST00000476413 FGF8P55075 233 aaPredicted RBP3.99□□□□□ -1.77
VPS50-212ENST00000476413 WNT4P56705 351 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 MRPS22P82650 360 aaKnown RBP3.99□□□□□ -1.77
VPS50-212ENST00000476413 ALKBH6Q3KRA9 238 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 VPS26BQ4G0F5 336 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 RAET1LQ5VY80 246 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 CARD17Q5XLA6 110 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 SLC8B1Q6J4K2 584 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 CNIH2Q6PI25 160 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 C6orf89Q6UWU4 347 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 GPR151Q8TDV0 419 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 KIFAP3Q92845 792 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 KCTD14Q9BQ13 255 aaPredicted RBP3.99□□□□□ -1.77
VPS50-212ENST00000476413 CENPKQ9BS16 269 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 HES7Q9BYE0 225 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 MRPL47Q9HD33 250 aaKnown RBP3.99□□□□□ -1.77
VPS50-212ENST00000476413 RAB20Q9NX57 234 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 NUP50Q9UKX7 468 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 PRG3Q9Y2Y8 225 aaPredicted RBP3.99□□□□□ -1.77
VPS50-212ENST00000476413 MSH6P52701 1360 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 SCN2AQ99250 2005 aa3.99□□□□□ -1.77
VPS50-212ENST00000476413 TCP11X1B4DZS4 312 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 SLC31A2O15432 143 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 SOX15O60248 233 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 DFNA5O60443 496 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 WBP4O75554 376 aaKnown RBP3.98□□□□□ -1.77
VPS50-212ENST00000476413 AGTP01019 485 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 ALDOBP05062 364 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 IGHV4-34P06331 123 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 SLC2A5P22732 501 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 NUDT1P36639 197 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 NOVP48745 357 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 PRRX1P54821 245 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 UNC119Q13432 240 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 RCN1Q15293 331 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 MRPL23Q16540 153 aaKnown RBP3.98□□□□□ -1.77
VPS50-212ENST00000476413 LY6G6FQ5SQ64 297 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 LCN12Q6JVE5 192 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 CEP112Q8N8E3 955 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 LINC01555Q8NAE3 123 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 HSD17B11Q8NBQ5 300 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 OR4F15Q8NGB8 312 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 ACER1Q8TDN7 264 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 MED8Q96G25 268 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 OR2M2Q96R28 347 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 PANX1Q96RD7 426 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 NRTNQ99748 197 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 FAM192AQ9GZU8 254 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 ABCB10Q9NRK6 738 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 ANAPC11Q9NYG5 84 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 ZNF225Q9UK10 706 aa3.98□□□□□ -1.77
VPS50-212ENST00000476413 LSM7Q9UK45 103 aaKnown RBP3.98□□□□□ -1.77
VPS50-212ENST00000476413 ERLIN2O94905 339 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 KLF8O95600 359 aaPredicted RBP3.97□□□□□ -1.77
VPS50-212ENST00000476413 KRT14P02533 472 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 KRT6AP02538 564 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 FGGP02679 453 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 GKN3PP0CG01 181 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 FOLR1P15328 257 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 CRISP2P16562 243 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 CCNHP51946 323 aaPredicted RBP3.97□□□□□ -1.77
VPS50-212ENST00000476413 ARHGAP19Q14CB8 494 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 LRRC10Q5BKY1 277 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 FBXL13Q8NEE6 735 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 STMN2Q93045 179 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 TMEM54Q969K7 222 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 ELSPBP1Q96BH3 223 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 SGK3Q96BR1 496 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms