RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 MRPS31Q92665 395 aaKnown RBP3.99□□□□□ -1.77
SMC5-203ENST00000475540 KIAA1143Q96AT1 154 aaPredicted RBP3.99□□□□□ -1.77
SMC5-203ENST00000475540 MBOAT4Q96T53 435 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 CNN2Q99439 309 aaKnown RBP3.99□□□□□ -1.77
SMC5-203ENST00000475540 MRPL37Q9BZE1 423 aaKnown RBP3.99□□□□□ -1.77
SMC5-203ENST00000475540 IL22Q9GZX6 179 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 RHBGQ9H310 441 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 ELOVL6Q9H5J4 265 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 SH2D2AQ9NP31 389 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 NUDT15Q9NV35 164 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 LYARQ9NX58 379 aaKnown RBP3.99□□□□□ -1.77
SMC5-203ENST00000475540 WRAP73Q9P2S5 460 aaPredicted RBP3.99□□□□□ -1.77
SMC5-203ENST00000475540 NUP50Q9UKX7 468 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 USP16Q9Y5T5 823 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 CACNG2Q9Y698 323 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 LOC100131303A0A0U1RQF7 123 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 LOC100506127A0A0U1RQW1 187 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 GABRR3A8MPY1 467 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 DLGAP1O14490 977 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 RGS16O15492 202 aaPredicted RBP3.98□□□□□ -1.77
SMC5-203ENST00000475540 YKT6O15498 198 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 PFKFB2O60825 505 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 GAPDHP04406 335 aaKnown RBP3.98□□□□□ -1.77
SMC5-203ENST00000475540 P04436 131 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 STAG3L2P0CL84 134 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 RNH1P13489 461 aaKnown RBP3.98□□□□□ -1.77
SMC5-203ENST00000475540 POLR2EP19388 210 aaKnown RBP3.98□□□□□ -1.77
SMC5-203ENST00000475540 GTF2E2P29084 291 aaKnown RBP3.98□□□□□ -1.77
SMC5-203ENST00000475540 PRDX3P30048 256 aaKnown RBP3.98□□□□□ -1.77
SMC5-203ENST00000475540 HMOX2P30519 316 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 IFNA8P32881 189 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 QARSP47897 775 aaKnown RBP3.98□□□□□ -1.77
SMC5-203ENST00000475540 RFX3P48380 749 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 BCAP31P51572 246 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 KCNJ2P63252 427 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 LIPEQ05469 1076 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 SLC10A7Q0GE19 358 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 Q3ZCU0 254 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 TIGITQ495A1 244 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 HSP90AA4PQ58FG1 418 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 LINC00523Q86TU6 105 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 CSGALNACT2Q8N6G5 542 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 ATP6V0D2Q8N8Y2 350 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 OR4F6Q8NGB9 312 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 GPR151Q8TDV0 419 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 NRGNQ92686 78 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 IL22RA2Q969J5 263 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 P2RY13Q9BPV8 354 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 TEKT3Q9BXF9 490 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 PPA2Q9H2U2 334 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 COPS3Q9UNS2 423 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 PLLPQ9Y342 182 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 N6AMT1Q9Y5N5 214 aa3.98□□□□□ -1.77
SMC5-203ENST00000475540 CLSPNQ9HAW4 1339 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 A0A1W2PPV9 198 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 SMCO2A6NFE2 343 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 E7ESA3 106 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 K7N7A8 449 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 CXCL13O43927 109 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 OR2J3O76001 311 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 SNAI1O95863 264 aaPredicted RBP3.97□□□□□ -1.77
SMC5-203ENST00000475540 MMP1P03956 469 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 AQP1P29972 269 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 CD80P33681 288 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 UQCRFS1P47985 274 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 APOC4P55056 127 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 PAX5Q02548 391 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 STK38Q15208 465 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 TRIM16LQ309B1 348 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 HNRNPA1L2Q32P51 320 aaKnown RBP3.97□□□□□ -1.77
SMC5-203ENST00000475540 LIN9Q5TKA1 542 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 CYB5R2Q6BCY4 276 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 TRIML2Q8N7C3 387 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 C20orf203Q8NBC4 194 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 LILRB4Q8NHJ6 448 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 MARCH1Q8TCQ1 289 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 TCTEX1D2Q8WW35 142 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 STMN2Q93045 179 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 CIDECQ96AQ7 238 aaPredicted RBP3.97□□□□□ -1.77
SMC5-203ENST00000475540 STARD4Q96DR4 205 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 PLEKHA8Q96JA3 519 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 ATP6V1G3Q96LB4 118 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 ZNF641Q96N77 438 aaPredicted RBP3.97□□□□□ -1.77
SMC5-203ENST00000475540 ARHGDIGQ99819 225 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 SRXN1Q9BYN0 137 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 NAT10Q9H0A0 1025 aaKnown RBP3.97□□□□□ -1.77
SMC5-203ENST00000475540 ZNF385DQ9H6B1 395 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 AGPAT3Q9NRZ7 376 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 PTTG3PQ9NZH4 202 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 TMCO1Q9UM00 188 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 BZW2Q9Y6E2 419 aaKnown RBP3.97□□□□□ -1.77
SMC5-203ENST00000475540 USP47Q96K76 1375 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 RLFQ13129 1914 aa3.97□□□□□ -1.77
SMC5-203ENST00000475540 IQANK1A0A1B0GTG1 560 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.96□□□□□ -1.78
SMC5-203ENST00000475540 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.96□□□□□ -1.78
SMC5-203ENST00000475540 A8MXQ7 604 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 FCN1O00602 326 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 PSTPIP1O43586 416 aa3.96□□□□□ -1.78
SMC5-203ENST00000475540 OR10H3O60404 316 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms