RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 USH1CQ9Y6N9 552 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 A0A0G2JPF8 293 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 HNRNPCL2B2RXH8 293 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 HNRNPCL3B7ZW38 293 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 OR2T1O43869 369 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 HNRNPCL1O60812 293 aaKnown RBP12.02□□□□□ -0.49
CCDC78-209ENST00000474647 SHOX2O60902 331 aaPredicted RBP12.02□□□□□ -0.49
CCDC78-209ENST00000474647 RAB36O95755 333 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 HNRNPCL4P0DMR1 293 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 NAT2P11245 290 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 HLA-DOBP13765 273 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 EPHA3P29320 983 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 EVX1P49640 407 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 AQP5P55064 265 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 RPS23P62266 143 aaKnown RBP12.02□□□□□ -0.49
CCDC78-209ENST00000474647 CBX1P83916 185 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 REP15Q6BDI9 236 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 NXNQ6DKJ4 435 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 CGB2Q6NT52 195 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 H1FNTQ75WM6 255 aaPredicted RBP12.02□□□□□ -0.49
CCDC78-209ENST00000474647 MAVSQ7Z434 540 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 GLB1L3Q8NCI6 653 aaPredicted RBP12.02□□□□□ -0.49
CCDC78-209ENST00000474647 YIPF5Q969M3 257 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 SIKE1Q9BRV8 207 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 B3GAT2Q9NPZ5 323 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 B3GNT2Q9NY97 397 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 DUSP13Q9UII6 198 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 POFUT2Q9Y2G5 429 aa12.02□□□□□ -0.49
CCDC78-209ENST00000474647 TRAV36DV7A0A075B6V5 113 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 TRPC5OSA6NMA1 111 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 TRIM77I1YAP6 450 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 SERPINI2O75830 405 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 NCR1O76036 304 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 PNPP00491 289 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 HPRP00739 348 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 IL6P05231 212 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 TROVE2P10155 538 aaKnown RBP eCLIP12.01□□□□□ -0.49
CCDC78-209ENST00000474647 ZNF35P13682 527 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 ZNF14P17017 642 aaPredicted RBP12.01□□□□□ -0.49
CCDC78-209ENST00000474647 EPHA1P21709 976 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 GLRXP35754 106 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 GIPRP48546 466 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 CAMK2DQ13557 499 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 MFSD13AQ14CX5 517 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 GLIPR1L2Q4G1C9 344 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 ALG10BQ5I7T1 473 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 C6orf10Q5SRN2 563 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 C5orf46Q6UWT4 87 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 PEG10Q86TG7 708 aaKnown RBP12.01□□□□□ -0.49
CCDC78-209ENST00000474647 C20orf196Q8IYI0 205 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 OR6N1Q8NGY5 312 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 STON2Q8WXE9 905 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 MAL2Q969L2 176 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 VPS33AQ96AX1 596 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 MAELQ96JY0 434 aaKnown RBP12.01□□□□□ -0.49
CCDC78-209ENST00000474647 ULBP2Q9BZM5 246 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 RMND5AQ9H871 391 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 MED29Q9NX70 200 aa12.01□□□□□ -0.49
CCDC78-209ENST00000474647 THUMPD1Q9NXG2 353 aaKnown RBP12.01□□□□□ -0.49
CCDC78-209ENST00000474647 LOC105371242A0A075B767 164 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 A0A1B0GWA3 101 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 GMNCA6NCL1 334 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 C5orf58C9J3I9 102 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 MS4A18H0YCH9 400 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 CDC14BO60729 498 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 SLC22A3O75751 556 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 NUDT7P0C024 238 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 EGR1P18146 543 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 HTR2AP28223 471 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 HILS1P60008 231 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 NCALDP61601 193 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 RAB1AP62820 205 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 RAB39AQ14964 217 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 NKPD1Q17RQ9 610 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 MS4A18Q3C1V0 323 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 EPGNQ6UW88 154 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 C6orf89Q6UWU4 347 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 MIER2Q8N344 545 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 C10orf53Q8N6V4 93 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 SGMS2Q8NHU3 365 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 BBS10Q8TAM1 723 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 FAM216AQ8WUB2 273 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 ITCHQ96J02 903 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 FOXB1Q99853 325 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 ZNF416Q9BWM5 594 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 ASPNQ9BXN1 380 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 NSRP1Q9H0G5 558 aaKnown RBP12□□□□□ -0.49
CCDC78-209ENST00000474647 OR51B6Q9H340 312 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 NPHS2Q9NP85 383 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 KLHL14Q9P2G3 628 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 MGAM2Q2M2H8 2515 aa12□□□□□ -0.49
CCDC78-209ENST00000474647 IGKV1D-42A0A075B6H8 117 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 A0A087WUJ7 227 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 TRAV20A0A0B4J274 112 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 TMEM89A2RUT3 159 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 ZNF726A6NNF4 738 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 FZD7O75084 574 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 UBL3O95164 117 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 ZCCHC18P0CG32 403 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 IDO1P14902 403 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms