RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 MEPEQ9NQ76 525 aaPredicted RBP14.43□□□□□ -0.1
USP40-212ENST00000473191 SONP18583 2426 aaKnown RBP14.42□□□□□ -0.1
USP40-212ENST00000473191 A8MV72 311 aaPredicted RBP14.42□□□□□ -0.1
USP40-212ENST00000473191 FMO6PO60774 539 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 C8BP07358 591 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 IGHV4-31P0DP07 118 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 CD79AP11912 226 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 HOXB1P14653 301 aaPredicted RBP14.42□□□□□ -0.1
USP40-212ENST00000473191 SLC25A16P16260 332 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 ZNF16P17020 682 aaPredicted RBP14.42□□□□□ -0.1
USP40-212ENST00000473191 DSCR9P59020 149 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 SNRPD2P62316 118 aaKnown RBP14.42□□□□□ -0.1
USP40-212ENST00000473191 SWT1Q5T5J6 900 aaKnown RBP14.42□□□□□ -0.1
USP40-212ENST00000473191 REP15Q6BDI9 236 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 ZNF813Q6ZN06 617 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 SLC46A3Q7Z3Q1 461 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 PXKQ7Z7A4 578 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 CALHM3Q86XJ0 350 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 HIPK1Q86Z02 1210 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 ARIH2OSQ8N7S6 290 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 FAM169BQ8N8A8 192 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 NUP37Q8NFH4 326 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 TSPEARQ8WU66 669 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 FOXN4Q96NZ1 517 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 ZNF426Q9BUY5 554 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 FGFR1OP2Q9NVK5 253 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 GMPR2Q9P2T1 348 aaKnown RBP14.42□□□□□ -0.1
USP40-212ENST00000473191 NOX1Q9Y5S8 564 aa14.42□□□□□ -0.1
USP40-212ENST00000473191 JMJD1CQ15652 2540 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 SH3PXD2BA1X283 911 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 B9A039 149 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 hCG_2039718K7EN88 272 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 AKAP8O43823 692 aaKnown RBP14.41□□□□□ -0.1
USP40-212ENST00000473191 VLDLRP98155 873 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 RUNX1T1Q06455 604 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 KLF10Q13118 480 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 GGTLC2Q14390 218 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 EFNB3Q15768 340 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 CARTPTQ16568 116 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 TRMT5Q32P41 509 aaKnown RBP14.41□□□□□ -0.1
USP40-212ENST00000473191 METTL21CQ5VZV1 264 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 TTC33Q6PID6 262 aaPredicted RBP14.41□□□□□ -0.1
USP40-212ENST00000473191 PATL1Q86TB9 770 aaKnown RBP14.41□□□□□ -0.1
USP40-212ENST00000473191 NKAIN4Q8IVV8 208 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 CDK20Q8IZL9 346 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 PFN4Q8NHR9 129 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 LRRC58Q96CX6 371 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 LRR1Q96L50 414 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 DOK1Q99704 481 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 SOX7Q9BT81 388 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 ULBP2Q9BZM5 246 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 ZNF446Q9NWS9 450 aa14.41□□□□□ -0.1
USP40-212ENST00000473191 IGHV4-61A0A0C4DH41 118 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 TRAPPC13A5PLN9 417 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 ZNF726A6NNF4 738 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 MT-ATP6P00846 226 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 ASAH2BP0C7U1 165 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 BMP4P12644 408 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 ZNF14P17017 642 aaPredicted RBP14.4□□□□□ -0.1
USP40-212ENST00000473191 USF1P22415 310 aaPredicted RBP14.4□□□□□ -0.1
USP40-212ENST00000473191 ARR3P36575 388 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 OR1E2P47887 323 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 UGT2B15P54855 530 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 LSM11P83369 360 aaKnown RBP eCLIP14.4□□□□□ -0.1
USP40-212ENST00000473191 SNTB2Q13425 540 aaKnown RBP14.4□□□□□ -0.1
USP40-212ENST00000473191 LRFN4Q6PJG9 635 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 SLC35D2Q76EJ3 337 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 CCDC80Q76M96 950 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 ZNF627Q7L945 461 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 SPATA21Q7Z572 469 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 ZNF584Q8IVC4 421 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 SKA3Q8IX90 412 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 OR4F15Q8NGB8 312 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 OR6N1Q8NGY5 312 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 SLC26A7Q8TE54 656 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 PROX1Q92786 737 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 TMEM54Q969K7 222 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 ZNF583Q96ND8 569 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 FOXB1Q99853 325 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 BPESC1Q9GZL8 116 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 PCDHAC1Q9H158 963 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 SAR1AQ9NR31 198 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 ARGLU1Q9NWB6 273 aaPredicted RBP14.4□□□□□ -0.1
USP40-212ENST00000473191 POFUT2Q9Y2G5 429 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 SH3GLB1Q9Y371 365 aa14.4□□□□□ -0.1
USP40-212ENST00000473191 LOC100653049A0A140TA62 436 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 RNF13O43567 381 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 KRT34O76011 436 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 PDE5AO76074 875 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 ZNF35P13682 527 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 FUT1P19526 365 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 NR4A2P43354 598 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 GIPRP48546 466 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 PTDSS1P48651 473 aaKnown RBP14.39□□□□□ -0.11
USP40-212ENST00000473191 CSNK1A1P48729 337 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 PDLIM4P50479 330 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 DAG1Q14118 895 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 GSG1Q2KHT4 349 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 LRP11Q86VZ4 500 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 CARM1Q86X55 608 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms