RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 FKBP7Q9Y680 259 aa6.92□□□□□ -1.3
CCDC171-205ENST00000472806 TDRD6O60522 2096 aaKnown RBP6.92□□□□□ -1.3
CCDC171-205ENST00000472806 SCN2AQ99250 2005 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 TMED7-TICAM2A0A0A6YYA0 188 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 LINC00854A0A1B0GVQ3 168 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 SHISA3A0PJX4 238 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 ANKUB1A6NFN9 424 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 TMEM212A6NML5 194 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 B4DXG7 233 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 FAM47E-STBD1D6RA91 191 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 LRRN3E7EW58 273 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 CTDSPLO15194 276 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 SUSD5O60279 629 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 FADS1O60427 444 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 SELENOFO60613 162 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 FZD7O75084 574 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 ALOX12BO75342 701 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 SLC43A1O75387 559 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 SCRG1O75711 98 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 SERPINI2O75830 405 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 UBL3O95164 117 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 ONECUT2O95948 504 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 IGHMP01871 453 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 RAF1P04049 648 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 GIMD1P0DJR0 217 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 FOSL2P15408 326 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 CRABP1P29762 137 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 APOBEC1P41238 236 aaKnown RBP6.91□□□□□ -1.3
CCDC171-205ENST00000472806 CDKN2AP42771 156 aaKnown RBP6.91□□□□□ -1.3
CCDC171-205ENST00000472806 DHPSP49366 369 aaPredicted RBP6.91□□□□□ -1.3
CCDC171-205ENST00000472806 DUSP3P51452 185 aaPredicted RBP6.91□□□□□ -1.3
CCDC171-205ENST00000472806 SCAND1P57086 179 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 RPL27P61353 136 aaKnown RBP6.91□□□□□ -1.3
CCDC171-205ENST00000472806 BTG1P62324 171 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 RNF4P78317 190 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 MRPS10P82664 201 aaKnown RBP6.91□□□□□ -1.3
CCDC171-205ENST00000472806 CFHR1Q03591 330 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 EGR4Q05215 589 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 NDUFA5Q16718 116 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 ZFP69Q49AA0 526 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 NKAIN1Q4KMZ8 207 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 UBE2NLQ5JXB2 153 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 LINC01590Q5TEZ4 76 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 EEF1A1P5Q5VTE0 462 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 APOOLQ6UXV4 268 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 SSX6Q7RTT6 188 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 ANKRD37Q7Z713 158 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 MARCH3Q86UD3 253 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 WDR5BQ86VZ2 330 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 CDC20BQ86Y33 519 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 PRR22Q8IZ63 422 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 EID2Q8N6I1 236 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 YIPF7Q8N8F6 280 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 EXD3Q8N9H8 876 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 OR51L1Q8NGJ5 315 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 OR5AK2Q8NH90 309 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 SLC22A8Q8TCC7 542 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 STT3BQ8TCJ2 826 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 GPR119Q8TDV5 335 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 TAAR8Q969N4 342 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 CREB3L1Q96BA8 519 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 DDIT4LQ96D03 193 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 KTI12Q96EK9 354 aaPredicted RBP6.91□□□□□ -1.3
CCDC171-205ENST00000472806 MOGAT1Q96PD6 335 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 NUDT22Q9BRQ3 303 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 THAP7Q9BT49 309 aaPredicted RBP6.91□□□□□ -1.3
CCDC171-205ENST00000472806 WACQ9BTA9 647 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 SEMA4CQ9C0C4 833 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 OR2B2Q9GZK3 357 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 TXNIPQ9H3M7 391 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 LRRN3Q9H3W5 708 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 MARCH7Q9H992 704 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 TCF7L1Q9HCS4 588 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 SACM1LQ9NTJ5 587 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 DDX28Q9NUL7 540 aaKnown RBP6.91□□□□□ -1.3
CCDC171-205ENST00000472806 NXT1Q9UKK6 140 aaKnown RBP6.91□□□□□ -1.3
CCDC171-205ENST00000472806 PPIEQ9UNP9 301 aaKnown RBP6.91□□□□□ -1.3
CCDC171-205ENST00000472806 CAMK2AQ9UQM7 478 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 RAXQ9Y2V3 346 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 TMED7Q9Y3B3 224 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 CHD9Q3L8U1 2897 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 CHD7Q9P2D1 2997 aa6.91□□□□□ -1.3
CCDC171-205ENST00000472806 A0A0G2JK05 382 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 CPED1A4D0V7 1026 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 NPIPB13A6NJU9 1138 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 NPIPB4C9JG80 1138 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 PLA2G10O15496 165 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 ARHGEF9O43307 516 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 ZNF208O43345 1280 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 SULT1B1O43704 296 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 SCO2O43819 266 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 ECDO95905 644 aaPredicted RBP6.9□□□□□ -1.3
CCDC171-205ENST00000472806 DHFRP00374 187 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 F13BP05160 661 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 RAB40ALP0C0E4 278 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 CALCBP10092 127 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 PSKH1P11801 424 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 SRMP19623 302 aa6.9□□□□□ -1.3
CCDC171-205ENST00000472806 FKBP2P26885 142 aaKnown RBP6.9□□□□□ -1.3
CCDC171-205ENST00000472806 CCKBRP32239 447 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms