RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 ROBO4Q8WZ75 1007 aa17.3■□□□□ 0.36
CHMP2B-204ENST00000472024 PTP4A1Q93096 173 aa17.3■□□□□ 0.36
CHMP2B-204ENST00000472024 NMD3Q96D46 503 aaKnown RBP17.3■□□□□ 0.36
CHMP2B-204ENST00000472024 PLEKHA8Q96JA3 519 aa17.3■□□□□ 0.36
CHMP2B-204ENST00000472024 LRR1Q96L50 414 aa17.3■□□□□ 0.36
CHMP2B-204ENST00000472024 KCNK17Q96T54 332 aa17.3■□□□□ 0.36
CHMP2B-204ENST00000472024 ALG12Q9BV10 488 aa17.3■□□□□ 0.36
CHMP2B-204ENST00000472024 CALHM2Q9HA72 323 aa17.3■□□□□ 0.36
CHMP2B-204ENST00000472024 RASSF1Q9NS23 344 aa17.3■□□□□ 0.36
CHMP2B-204ENST00000472024 KLHL9Q9P2J3 617 aa17.3■□□□□ 0.36
CHMP2B-204ENST00000472024 TNFRSF10DQ9UBN6 386 aa17.3■□□□□ 0.36
CHMP2B-204ENST00000472024 ZNF835Q9Y2P0 537 aa17.3■□□□□ 0.36
CHMP2B-204ENST00000472024 FLVCR1Q9Y5Y0 555 aa17.3■□□□□ 0.36
CHMP2B-204ENST00000472024 PRSS37A4D1T9 235 aa17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 CD8B2A6NJW9 211 aa17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 NPIPA2E9PIF3 369 aa17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 NPIPA3F8WFD2 350 aa17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 GPR171O14626 319 aa17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 PRODHO43272 600 aa17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 HOXD4P09016 255 aaPredicted RBP17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 SLC2A5P22732 501 aa17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 PTGS2P35354 604 aa17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 ZNF133P52736 654 aaPredicted RBP17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 CHN2P52757 468 aa17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 TOP3AQ13472 1001 aaPredicted RBP17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 C1DQ13901 141 aaKnown RBP17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 HIST3H3Q16695 136 aa17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 RBM48Q5RL73 367 aaKnown RBP17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 OR52E2Q8NGJ4 325 aa17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 OR4K13Q8NH42 304 aa17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 FNDC9Q8TBE3 224 aa17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 TXNDC15Q96J42 360 aa17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 ZNF582Q96NG8 517 aaPredicted RBP17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 IL4I1Q96RQ9 567 aa17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 MRPS18AQ9NVS2 196 aaKnown RBP17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 CLN6Q9NWW5 311 aa17.29■□□□□ 0.36
CHMP2B-204ENST00000472024 PRRC2CQ9Y520 2896 aaKnown RBP17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 ALPK2Q86TB3 2170 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 OR6C68A6NDL8 312 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 WDR1O75083 606 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 ENTPD6O75354 484 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 AQP8O94778 261 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 PLGP00747 810 aaPredicted RBP17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 EDN3P14138 238 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 GABRA1P14867 456 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 PAICSP22234 425 aaKnown RBP17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 ACVR1BP36896 505 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 SLC15A1P46059 708 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 RASGEF1BQ0VAM2 473 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 GUSBP1Q15486 140 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 KCTD21Q4G0X4 260 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 ACSF3Q4G176 576 aaPredicted RBP17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 NIPAL3Q6P499 406 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 CHMP1BQ7LBR1 199 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 CXXC5Q7LFL8 322 aaKnown RBP17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 GPAT4Q86UL3 456 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 CPOQ8IVL8 374 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 GID4Q8IVV7 300 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 WDFY1Q8IWB7 410 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 TMEM123Q8N131 208 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 SDR9C7Q8NEX9 313 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 FAM57AQ8TBR7 257 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 FNDC8Q8TC99 324 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 WNT2BQ93097 391 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 SLC25A44Q96H78 314 aaPredicted RBP17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 NMNAT3Q96T66 252 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 GLRX2Q9NS18 164 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 ASF1BQ9NVP2 202 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 FKBP14Q9NWM8 211 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 MED29Q9NX70 200 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 GPR52Q9Y2T5 361 aa17.28■□□□□ 0.36
CHMP2B-204ENST00000472024 SLC22A23A1A5C7 686 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 SLC22A20A6NK97 555 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 PRR23D1E9PI22 279 aaPredicted RBP17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 SLC1A7O00341 560 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 XKRYO14609 159 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 AKAP8O43823 692 aaKnown RBP17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 TRMUO75648 421 aaKnown RBP17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 PGA4P0DJD7 388 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 PGA3P0DJD8 388 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 PRR23D2P0DMB1 279 aaPredicted RBP17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 CRHBPP24387 322 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 ACVR2AP27037 513 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 MLLT10P55197 1068 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 RUNX1T1Q06455 604 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 NSUN5P2Q63ZY6 315 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 GTF2IRD2BQ6EKJ0 949 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 LEG1Q6P5S2 330 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 GTF2IRD2Q86UP8 949 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 ZBTB46Q86UZ6 589 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 JAZF1Q86VZ6 243 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 ABHD3Q8WU67 409 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 RFKQ969G6 155 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 ZNF385AQ96PM9 386 aaKnown RBP17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 ZNF696Q9H7X3 374 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 HAO2Q9NYQ3 351 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 EMC3Q9P0I2 261 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 AASSQ9UDR5 926 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 FKBP7Q9Y680 259 aa17.27■□□□□ 0.36
CHMP2B-204ENST00000472024 SLC35F4A4IF30 521 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms