RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 MAP2K6P52564 334 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 MTPNP58546 118 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 GUCY1A3Q02108 690 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 CYLC2Q14093 348 aaPredicted RBP5.06□□□□□ -1.6
VARS-222ENST00000470953 TRMT5Q32P41 509 aaKnown RBP5.06□□□□□ -1.6
VARS-222ENST00000470953 PAGE3Q5JUK9 113 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 OTUD3Q5T2D3 398 aaPredicted RBP5.06□□□□□ -1.6
VARS-222ENST00000470953 LRIF1Q5T3J3 769 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 INTS11Q5TA45 600 aaKnown RBP5.06□□□□□ -1.6
VARS-222ENST00000470953 ABLIM2Q6H8Q1 611 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 ADAMTSL5Q6ZMM2 481 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 BHLHA15Q7RTS1 189 aaPredicted RBP5.06□□□□□ -1.6
VARS-222ENST00000470953 ABHD12BQ7Z5M8 362 aaPredicted RBP5.06□□□□□ -1.6
VARS-222ENST00000470953 MTDHQ86UE4 582 aaKnown RBP5.06□□□□□ -1.6
VARS-222ENST00000470953 CARM1Q86X55 608 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 SLC30A8Q8IWU4 369 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 PIP4P2Q8N4L2 257 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 SIGLECL1Q8N7X8 197 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 PCYOX1LQ8NBM8 494 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 HIPK4Q8NE63 616 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 BHLHE22Q8NFJ8 381 aaPredicted RBP5.06□□□□□ -1.6
VARS-222ENST00000470953 OR52E4Q8NGH9 312 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 STON2Q8WXE9 905 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 DDB2Q92466 427 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 SGCDQ92629 289 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 ZNF775Q96BV0 537 aaPredicted RBP5.06□□□□□ -1.6
VARS-222ENST00000470953 ZG16BQ96DA0 208 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 FBXO17Q96EF6 278 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 RSRC1Q96IZ7 334 aaKnown RBP5.06□□□□□ -1.6
VARS-222ENST00000470953 ARL5BQ96KC2 179 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 LRRC37BQ96QE4 947 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 CGREF1Q99674 301 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 SH3GL1Q99961 368 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 PSD2Q9BQI7 771 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 CPPED1Q9BRF8 314 aaPredicted RBP5.06□□□□□ -1.6
VARS-222ENST00000470953 NSRP1Q9H0G5 558 aaKnown RBP5.06□□□□□ -1.6
VARS-222ENST00000470953 SLC25A37Q9NYZ2 338 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 VAPAQ9P0L0 249 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 TESQ9UGI8 421 aaKnown RBP5.06□□□□□ -1.6
VARS-222ENST00000470953 OSGIN1Q9UJX0 560 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 FKBP7Q9Y680 259 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 PMF1-BGLAPU3KQ54 211 aa5.06□□□□□ -1.6
VARS-222ENST00000470953 A0A1W2PR80 420 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 DNAJC9-AS1A6NH13 148 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 A8MVM7 634 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 B4DSR2 109 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 LYNX1G3V0Z9 82 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 ETV2O00321 342 aaPredicted RBP5.05□□□□□ -1.6
VARS-222ENST00000470953 MRASO14807 208 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 AHCYL1O43865 530 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 EFNA2O43921 213 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 DNAJA2O60884 412 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 PEX14O75381 377 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 MTRF1O75570 445 aaKnown RBP5.05□□□□□ -1.6
VARS-222ENST00000470953 RAD51DO75771 328 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 BCL10O95999 233 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 OPN1SWP03999 348 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 LYNX1P0DP58 116 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 PNMTP11086 282 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 CDH2P19022 906 aaPredicted RBP5.05□□□□□ -1.6
VARS-222ENST00000470953 GGT1P19440 569 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 PCMT1P22061 227 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 PRTN3P24158 256 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 CD40P25942 277 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 PCGF2P35227 344 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 OR3A2P47893 321 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 ZNF83P51522 516 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 MVDP53602 400 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 HOXC5Q00444 222 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 TGFBR3Q03167 851 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 CHRNB3Q05901 458 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 RBBP4Q09028 425 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 BNIP2Q12982 314 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 ITGADQ13349 1161 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 RIN1Q13671 783 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 C1DQ13901 141 aaKnown RBP5.05□□□□□ -1.6
VARS-222ENST00000470953 CEACAM7Q14002 265 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 TAF9Q16594 264 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 OXLD1Q5BKU9 147 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 ALG10BQ5I7T1 473 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 C1orf140Q5VVS0 124 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 METTL21CQ5VZV1 264 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 TMEM225Q6GV28 225 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 ZNF544Q6NX49 715 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 PAQR6Q6TCH4 344 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 KLHL17Q6TDP4 642 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 Q6ZT83 130 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 AAED1Q7RTV5 226 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 SNX32Q86XE0 403 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 ADGRG3Q86Y34 549 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 FUNDC1Q8IVP5 155 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 CLIP4Q8N3C7 705 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 SMYD1Q8NB12 490 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 ZNF540Q8NDQ6 660 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 VANGL1Q8TAA9 524 aaPredicted RBP5.05□□□□□ -1.6
VARS-222ENST00000470953 FAM81AQ8TBF8 368 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 DNAJA4Q8WW22 397 aaPredicted RBP5.05□□□□□ -1.6
VARS-222ENST00000470953 LZICQ8WZA0 190 aa5.05□□□□□ -1.6
VARS-222ENST00000470953 DVL3Q92997 716 aaPredicted RBP5.05□□□□□ -1.6
VARS-222ENST00000470953 SLC38A4Q969I6 547 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms