RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 OR5B21A6NL26 309 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 GOLGA8SH3BPF8 625 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 EMC8O43402 210 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 SUPT7LO94864 414 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 GABRR1P24046 479 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 EPS15P42566 896 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 SULT1E1P49888 294 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 CAV2P51636 162 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 GPM6AP51674 278 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 GNB2P62879 340 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 GK3PQ14409 553 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 IL17AQ16552 155 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 KCTD21Q4G0X4 260 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 OTPQ5XKR4 325 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 RFLNAQ6ZTI6 216 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 TGIF2LXQ8IUE1 241 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 EGFL6Q8IUX8 553 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 SLC22A9Q8IVM8 553 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 SDR9C7Q8NEX9 313 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 OR10G3Q8NGC4 313 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 OR1L6Q8NGR2 347 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 SETD7Q8WTS6 366 aaKnown RBP3.52□□□□□ -1.85
LSM5-209ENST00000468872 DCUN1D4Q92564 292 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 IMMP1LQ96LU5 166 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 PANX2Q96RD6 677 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 KCNA7Q96RP8 456 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 P2RY13Q9BPV8 354 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 TCHPQ9BT92 498 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 ACTR6Q9GZN1 396 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 PPA2Q9H2U2 334 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 PRO3102Q9H379 93 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 ANKRD19PQ9H560 264 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 NARFLQ9H6Q4 476 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 NIPAL2Q9H841 368 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 TRAF3IP3Q9Y228 551 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 ZNF256Q9Y2P7 627 aaPredicted RBP3.52□□□□□ -1.85
LSM5-209ENST00000468872 NWD2Q9ULI1 1742 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 GCN1Q92616 2671 aaKnown RBP3.52□□□□□ -1.85
LSM5-209ENST00000468872 SAMD9Q5K651 1589 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 NRAPQ86VF7 1730 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 A0A1W2PPV9 198 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 H0Y8G0 127 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 KLK3P07288 261 aaPredicted RBP3.51□□□□□ -1.85
LSM5-209ENST00000468872 RPS2P15880 293 aaKnown RBP3.51□□□□□ -1.85
LSM5-209ENST00000468872 FUT3P21217 361 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 COX7A1P24310 79 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 CD1CP29017 333 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 TPMTP51580 245 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 KPNA2P52292 529 aaKnown RBP3.51□□□□□ -1.85
LSM5-209ENST00000468872 KRTAP10-8P60410 259 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 TLE4Q04727 773 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 SCRN3Q0VDG4 424 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 ZNF77Q15935 545 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 CCDC183Q5T5S1 534 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 TMIGD1Q6UXZ0 262 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 ZYG11AQ6WRX3 759 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 UTS2BQ765I0 119 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 RUFY3Q7L099 469 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 ZNF571Q7Z3V5 609 aaPredicted RBP3.51□□□□□ -1.85
LSM5-209ENST00000468872 NUDCD3Q8IVD9 361 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 CDH26Q8IXH8 852 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 PRR22Q8IZ63 422 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 UBE2J2Q8N2K1 259 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 ACOT4Q8N9L9 421 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 AKR7LQ8NHP1 331 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 NEIL3Q8TAT5 605 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 RNF139Q8WU17 664 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 ITCHQ96J02 903 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 CNDP1Q96KN2 507 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 NAT9Q9BTE0 207 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 ASF1AQ9Y294 204 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 CDH10Q9Y6N8 788 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 C1orf167Q5SNV9 1468 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 CHD2O14647 1828 aaKnown RBP3.51□□□□□ -1.85
LSM5-209ENST00000468872 C5orf42Q9H799 3197 aa3.51□□□□□ -1.85
LSM5-209ENST00000468872 REV3LO60673 3130 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 SYCP2Q9BX26 1530 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 NUP153P49790 1475 aaKnown RBP3.5□□□□□ -1.85
LSM5-209ENST00000468872 A0A0G2JLM5 398 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 E9PBE3 544 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 ABCD4O14678 606 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 BBOX1O75936 387 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 ACTL6AO96019 429 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 P04436 131 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 UQCRFS1P1P0C7P4 283 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 DUX4L4P0CJ87 422 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 SLC2A3P11169 496 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 SSR1P43307 286 aaKnown RBP3.5□□□□□ -1.85
LSM5-209ENST00000468872 GYG1P46976 350 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 PPIL2Q13356 520 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 ORC2Q13416 577 aaPredicted RBP3.5□□□□□ -1.85
LSM5-209ENST00000468872 DGUOKQ16854 277 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 ZNF630Q2M218 657 aaPredicted RBP3.5□□□□□ -1.85
LSM5-209ENST00000468872 MARCH8Q5T0T0 291 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 CASC10Q5T4H9 136 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 PRAMEF5Q5TYX0 476 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 PRAMEF6Q5VXH4 476 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 C1orf94Q6P1W5 598 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 Q6ZN92 141 aa3.5□□□□□ -1.85
LSM5-209ENST00000468872 TPRX1Q8N7U7 411 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms